Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.26■□□□□ 0.35
COL21A1Q96P44 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COL21A1Q96P44 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL21A1Q96P44 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 MYLKP1-201ENST00000509077 1580 ntBASIC17.25■□□□□ 0.35
COL21A1Q96P44 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 MIR3180-5-201ENST00000583743 153 ntBASIC17.25■□□□□ 0.35
COL21A1Q96P44 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
COL21A1Q96P44 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL21A1Q96P44 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 OR6D1P-202ENST00000641007 5290 ntBASIC17.24■□□□□ 0.35
COL21A1Q96P44 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 LIN28AP1-201ENST00000429574 405 ntBASIC17.24■□□□□ 0.35
COL21A1Q96P44 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 CR769767.2-201ENST00000622735 460 ntBASIC17.24■□□□□ 0.35
COL21A1Q96P44 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL21A1Q96P44 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
COL21A1Q96P44 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 AC113347.1-201ENST00000413321 391 ntBASIC17.23■□□□□ 0.35
COL21A1Q96P44 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms