Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC10.54□□□□□ -0.72
RPS28P62857 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.54□□□□□ -0.72
RPS28P62857 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC10.54□□□□□ -0.72
RPS28P62857 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
RPS28P62857 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC10.54□□□□□ -0.72
RPS28P62857 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPS28P62857 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
RPS28P62857 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
RPS28P62857 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.53□□□□□ -0.72
RPS28P62857 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC10.53□□□□□ -0.72
RPS28P62857 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 BX119927.1-201ENST00000636596 1552 ntBASIC10.53□□□□□ -0.72
RPS28P62857 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RPS28P62857 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC10.53□□□□□ -0.72
RPS28P62857 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RPS28P62857 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC10.53□□□□□ -0.72
RPS28P62857 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.53□□□□□ -0.72
RPS28P62857 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC10.53□□□□□ -0.72
RPS28P62857 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC10.53□□□□□ -0.72
RPS28P62857 AC141586.3-201ENST00000562166 1838 ntBASIC10.53□□□□□ -0.72
RPS28P62857 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC10.53□□□□□ -0.72
RPS28P62857 CD37-204ENST00000535669 1674 ntTSL 2 BASIC10.53□□□□□ -0.72
RPS28P62857 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.53□□□□□ -0.72
RPS28P62857 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPS28P62857 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RPS28P62857 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC10.52□□□□□ -0.72
RPS28P62857 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.52□□□□□ -0.72
RPS28P62857 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
RPS28P62857 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
RPS28P62857 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
RPS28P62857 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
RPS28P62857 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.52□□□□□ -0.72
RPS28P62857 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC10.52□□□□□ -0.72
RPS28P62857 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
RPS28P62857 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
RPS28P62857 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC10.52□□□□□ -0.73
RPS28P62857 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RPS28P62857 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RPS28P62857 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
RPS28P62857 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.52□□□□□ -0.73
RPS28P62857 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
RPS28P62857 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC10.52□□□□□ -0.73
RPS28P62857 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC10.52□□□□□ -0.73
RPS28P62857 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RPS28P62857 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms