Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GTF2A1P52655 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.93■□□□□ 0.46
GTF2A1P52655 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GTF2A1P52655 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GTF2A1P52655 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GTF2A1P52655 AC138028.4-201ENST00000564984 1845 ntBASIC17.93■□□□□ 0.46
GTF2A1P52655 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GTF2A1P52655 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GTF2A1P52655 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GTF2A1P52655 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GTF2A1P52655 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GTF2A1P52655 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GTF2A1P52655 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 AC068587.6-202ENST00000641839 5619 ntBASIC17.92■□□□□ 0.46
GTF2A1P52655 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GTF2A1P52655 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.92■□□□□ 0.46
GTF2A1P52655 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.92■□□□□ 0.46
GTF2A1P52655 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 AGGF1P2-201ENST00000426656 2106 ntBASIC17.92■□□□□ 0.46
GTF2A1P52655 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GTF2A1P52655 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.92■□□□□ 0.46
GTF2A1P52655 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.91■□□□□ 0.46
GTF2A1P52655 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GTF2A1P52655 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GTF2A1P52655 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GTF2A1P52655 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.91■□□□□ 0.46
GTF2A1P52655 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GTF2A1P52655 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.91■□□□□ 0.46
GTF2A1P52655 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.91■□□□□ 0.46
GTF2A1P52655 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.91■□□□□ 0.46
GTF2A1P52655 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GTF2A1P52655 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GTF2A1P52655 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GTF2A1P52655 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.9■□□□□ 0.46
GTF2A1P52655 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 AC106886.4-201ENST00000623557 2502 ntBASIC17.9■□□□□ 0.46
GTF2A1P52655 AC116050.2-201ENST00000612102 1779 ntBASIC17.9■□□□□ 0.46
GTF2A1P52655 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 AC245052.3-201ENST00000450182 901 ntBASIC17.9■□□□□ 0.46
GTF2A1P52655 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
GTF2A1P52655 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.9■□□□□ 0.46
GTF2A1P52655 AC012414.1-201ENST00000556676 535 ntBASIC17.9■□□□□ 0.46
GTF2A1P52655 TPRG1LP1-201ENST00000598702 760 ntBASIC17.9■□□□□ 0.46
GTF2A1P52655 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.9■□□□□ 0.46
GTF2A1P52655 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GTF2A1P52655 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.9■□□□□ 0.46
GTF2A1P52655 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GTF2A1P52655 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.9■□□□□ 0.46
GTF2A1P52655 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
GTF2A1P52655 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
GTF2A1P52655 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms