Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRIM2P49643 AC008556.1-201ENST00000610908 2040 ntBASIC17.39■□□□□ 0.37
PRIM2P49643 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRIM2P49643 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRIM2P49643 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PRIM2P49643 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.39■□□□□ 0.37
PRIM2P49643 SLC25A1P2-201ENST00000430693 912 ntBASIC17.39■□□□□ 0.37
PRIM2P49643 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.39■□□□□ 0.37
PRIM2P49643 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PRIM2P49643 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PRIM2P49643 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.39■□□□□ 0.37
PRIM2P49643 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.39■□□□□ 0.37
PRIM2P49643 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRIM2P49643 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PRIM2P49643 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PRIM2P49643 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRIM2P49643 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
PRIM2P49643 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PRIM2P49643 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.38■□□□□ 0.37
PRIM2P49643 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRIM2P49643 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.38■□□□□ 0.37
PRIM2P49643 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.38■□□□□ 0.37
PRIM2P49643 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.38■□□□□ 0.37
PRIM2P49643 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.38■□□□□ 0.37
PRIM2P49643 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.38■□□□□ 0.37
PRIM2P49643 FITM1-202ENST00000559294 800 ntBASIC17.38■□□□□ 0.37
PRIM2P49643 AP000525.1-201ENST00000608286 694 ntBASIC17.38■□□□□ 0.37
PRIM2P49643 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PRIM2P49643 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.38■□□□□ 0.37
PRIM2P49643 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRIM2P49643 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PRIM2P49643 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRIM2P49643 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PRIM2P49643 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRIM2P49643 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.37■□□□□ 0.37
PRIM2P49643 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
PRIM2P49643 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.37■□□□□ 0.37
PRIM2P49643 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRIM2P49643 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 MIR564-202ENST00000385049 94 ntBASIC17.37■□□□□ 0.37
PRIM2P49643 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.37■□□□□ 0.37
PRIM2P49643 CCR12P-201ENST00000446203 998 ntBASIC17.37■□□□□ 0.37
PRIM2P49643 TSPY17P-201ENST00000450329 467 ntBASIC17.37■□□□□ 0.37
PRIM2P49643 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 MIR4497-201ENST00000583208 89 ntBASIC17.37■□□□□ 0.37
PRIM2P49643 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.37■□□□□ 0.37
PRIM2P49643 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRIM2P49643 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PRIM2P49643 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRIM2P49643 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.36■□□□□ 0.37
PRIM2P49643 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRIM2P49643 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.36■□□□□ 0.37
PRIM2P49643 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRIM2P49643 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRIM2P49643 MIR1238-201ENST00000408483 83 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms