Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC9A3P48764 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC9A3P48764 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 UBE2SP1-201ENST00000450587 669 ntBASIC16.76■□□□□ 0.27
SLC9A3P48764 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC9A3P48764 SLC25A1P4-201ENST00000567977 778 ntBASIC16.76■□□□□ 0.27
SLC9A3P48764 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.76■□□□□ 0.27
SLC9A3P48764 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 SIRPAP1-201ENST00000448467 1770 ntBASIC16.76■□□□□ 0.27
SLC9A3P48764 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC9A3P48764 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC9A3P48764 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC9A3P48764 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC9A3P48764 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC9A3P48764 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC9A3P48764 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC9A3P48764 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 AC034236.2-201ENST00000606662 1610 ntBASIC16.75■□□□□ 0.27
SLC9A3P48764 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC9A3P48764 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC9A3P48764 AC012618.2-201ENST00000428058 849 ntBASIC16.75■□□□□ 0.27
SLC9A3P48764 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 AC142381.4-202ENST00000563973 229 ntBASIC16.75■□□□□ 0.27
SLC9A3P48764 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC9A3P48764 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC9A3P48764 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC9A3P48764 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC9A3P48764 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC9A3P48764 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SLC9A3P48764 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC9A3P48764 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC9A3P48764 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC9A3P48764 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SLC9A3P48764 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SLC9A3P48764 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 RPS2P55-201ENST00000397318 883 ntBASIC16.74■□□□□ 0.27
SLC9A3P48764 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC9A3P48764 AC107956.1-201ENST00000494359 873 ntBASIC16.74■□□□□ 0.27
SLC9A3P48764 AC097488.1-201ENST00000507834 756 ntBASIC16.74■□□□□ 0.27
SLC9A3P48764 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC9A3P48764 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC9A3P48764 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC9A3P48764 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC9A3P48764 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC9A3P48764 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC9A3P48764 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 GPAT2P1-201ENST00000444924 1672 ntBASIC16.74■□□□□ 0.27
SLC9A3P48764 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC9A3P48764 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLC9A3P48764 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC9A3P48764 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC9A3P48764 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC9A3P48764 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC9A3P48764 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 AC093677.2-201ENST00000600169 1863 ntBASIC16.73■□□□□ 0.27
SLC9A3P48764 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC9A3P48764 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC9A3P48764 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC9A3P48764 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC9A3P48764 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC9A3P48764 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 PRORSD1P-201ENST00000295112 541 ntBASIC16.73■□□□□ 0.27
SLC9A3P48764 ABHD17AP1-201ENST00000358206 933 ntBASIC16.73■□□□□ 0.27
SLC9A3P48764 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms