Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.33□□□□□ -0.43
CXCL5P42830 AL499627.1-201ENST00000569373 2188 ntBASIC12.33□□□□□ -0.44
CXCL5P42830 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CXCL5P42830 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.33□□□□□ -0.44
CXCL5P42830 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.33□□□□□ -0.44
CXCL5P42830 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CXCL5P42830 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.33□□□□□ -0.44
CXCL5P42830 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CXCL5P42830 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.33□□□□□ -0.44
CXCL5P42830 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CXCL5P42830 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.33□□□□□ -0.44
CXCL5P42830 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CXCL5P42830 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.33□□□□□ -0.44
CXCL5P42830 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CXCL5P42830 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL5P42830 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CXCL5P42830 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL5P42830 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.32□□□□□ -0.44
CXCL5P42830 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 KRT17P3-201ENST00000420566 1262 ntBASIC12.32□□□□□ -0.44
CXCL5P42830 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 KRT16P5-201ENST00000455284 522 ntBASIC12.32□□□□□ -0.44
CXCL5P42830 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.32□□□□□ -0.44
CXCL5P42830 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CXCL5P42830 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CXCL5P42830 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.32□□□□□ -0.44
CXCL5P42830 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.32□□□□□ -0.44
CXCL5P42830 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CXCL5P42830 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.32□□□□□ -0.44
CXCL5P42830 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.32□□□□□ -0.44
CXCL5P42830 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.32□□□□□ -0.44
CXCL5P42830 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CXCL5P42830 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
CXCL5P42830 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CXCL5P42830 RCC2P3-201ENST00000418112 1537 ntBASIC12.32□□□□□ -0.44
CXCL5P42830 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CXCL5P42830 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL5P42830 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CXCL5P42830 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL5P42830 AL162727.3-201ENST00000635661 2787 ntBASIC12.31□□□□□ -0.44
CXCL5P42830 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms