Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX6P35712 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SOX6P35712 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.39■□□□□ 0.21
SOX6P35712 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX6P35712 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX6P35712 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
SOX6P35712 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.39■□□□□ 0.21
SOX6P35712 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
SOX6P35712 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SOX6P35712 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SOX6P35712 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.38■□□□□ 0.21
SOX6P35712 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX6P35712 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX6P35712 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX6P35712 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX6P35712 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX6P35712 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX6P35712 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX6P35712 AC069236.1-201ENST00000604339 616 ntBASIC16.38■□□□□ 0.21
SOX6P35712 AC005181.1-201ENST00000604782 1256 ntBASIC16.38■□□□□ 0.21
SOX6P35712 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX6P35712 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX6P35712 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SOX6P35712 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SOX6P35712 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SOX6P35712 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX6P35712 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.37■□□□□ 0.21
SOX6P35712 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.37■□□□□ 0.21
SOX6P35712 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SOX6P35712 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 AC008556.1-201ENST00000610908 2040 ntBASIC16.37■□□□□ 0.21
SOX6P35712 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SOX6P35712 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX6P35712 AP006587.1-201ENST00000534129 1502 ntBASIC16.37■□□□□ 0.21
SOX6P35712 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SOX6P35712 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.37■□□□□ 0.21
SOX6P35712 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.37■□□□□ 0.21
SOX6P35712 LINC00602-201ENST00000629776 2065 ntBASIC16.37■□□□□ 0.21
SOX6P35712 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX6P35712 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX6P35712 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
SOX6P35712 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX6P35712 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SOX6P35712 AC068338.2-201ENST00000563278 1430 ntBASIC16.36■□□□□ 0.21
SOX6P35712 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.36■□□□□ 0.21
SOX6P35712 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX6P35712 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SOX6P35712 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.36■□□□□ 0.21
SOX6P35712 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms