Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OPHN1O60890 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
OPHN1O60890 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.06■□□□□ 0.64
OPHN1O60890 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
OPHN1O60890 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.06■□□□□ 0.64
OPHN1O60890 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 HTR7P1-202ENST00000624664 4411 ntBASIC19.06■□□□□ 0.64
OPHN1O60890 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
OPHN1O60890 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.06■□□□□ 0.64
OPHN1O60890 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.06■□□□□ 0.64
OPHN1O60890 AL353719.1-201ENST00000566847 864 ntBASIC19.06■□□□□ 0.64
OPHN1O60890 AL023803.3-201ENST00000615559 522 ntBASIC19.06■□□□□ 0.64
OPHN1O60890 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
OPHN1O60890 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.06■□□□□ 0.64
OPHN1O60890 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPHN1O60890 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
OPHN1O60890 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.06■□□□□ 0.64
OPHN1O60890 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
OPHN1O60890 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.05■□□□□ 0.64
OPHN1O60890 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
OPHN1O60890 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 AC008556.1-201ENST00000610908 2040 ntBASIC19.05■□□□□ 0.64
OPHN1O60890 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.05■□□□□ 0.64
OPHN1O60890 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.05■□□□□ 0.64
OPHN1O60890 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.05■□□□□ 0.64
OPHN1O60890 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.05■□□□□ 0.64
OPHN1O60890 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 AL023284.2-201ENST00000405850 579 ntBASIC19.05■□□□□ 0.64
OPHN1O60890 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.05■□□□□ 0.64
OPHN1O60890 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.05■□□□□ 0.64
OPHN1O60890 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
OPHN1O60890 KRT18P41-201ENST00000518924 1277 ntBASIC19.05■□□□□ 0.64
OPHN1O60890 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.05■□□□□ 0.64
OPHN1O60890 AC069148.1-201ENST00000608741 768 ntBASIC19.05■□□□□ 0.64
OPHN1O60890 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.05■□□□□ 0.64
OPHN1O60890 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.05■□□□□ 0.64
OPHN1O60890 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPHN1O60890 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.04■□□□□ 0.64
OPHN1O60890 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.04■□□□□ 0.64
OPHN1O60890 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
OPHN1O60890 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
OPHN1O60890 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
OPHN1O60890 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.04■□□□□ 0.64
OPHN1O60890 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
OPHN1O60890 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.04■□□□□ 0.64
OPHN1O60890 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.04■□□□□ 0.64
OPHN1O60890 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 MCCD1P1-208ENST00000445732 328 ntBASIC19.04■□□□□ 0.64
OPHN1O60890 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.04■□□□□ 0.64
OPHN1O60890 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
OPHN1O60890 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 AL691432.3-201ENST00000621860 400 ntBASIC19.04■□□□□ 0.64
OPHN1O60890 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.04■□□□□ 0.64
OPHN1O60890 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
OPHN1O60890 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms