Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 MIR149-201ENST00000384879 89 ntBASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 MIR3180-4-201ENST00000582223 153 ntBASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 AC009102.3-201ENST00000623118 1491 ntBASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 GMCL1P1-201ENST00000463439 1581 ntBASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 AC093677.2-201ENST00000600169 1863 ntBASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA11Q9Y5H2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 INGX-201ENST00000359239 846 ntBASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 HMGA1P5-201ENST00000412453 271 ntBASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 AC104390.1-201ENST00000555663 520 ntBASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA11Q9Y5H2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 AC008764.6-201ENST00000595909 2069 ntBASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PCDHGA11Q9Y5H2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.71■□□□□ 0.42
PCDHGA11Q9Y5H2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA11Q9Y5H2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA11Q9Y5H2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA11Q9Y5H2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA11Q9Y5H2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA11Q9Y5H2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA11Q9Y5H2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms