Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 EMBP1-201ENST00000458200 901 ntBASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 KRT18P31-201ENST00000506277 1292 ntBASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.17■□□□□ 0.66
ATXN3LQ9H3M9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 CROCCP3-202ENST00000420820 1947 ntBASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 RN7SL606P-201ENST00000472779 293 ntBASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 AC099336.1-202ENST00000602961 463 ntBASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 AC099343.3-201ENST00000605834 2503 ntBASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATXN3LQ9H3M9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 KRT17P6-201ENST00000453795 1220 ntBASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 VENTXP7-201ENST00000475503 772 ntBASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ATXN3LQ9H3M9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATXN3LQ9H3M9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATXN3LQ9H3M9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3LQ9H3M9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms