Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.73■□□□□ 0.27
HPS1Q92902 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.73■□□□□ 0.27
HPS1Q92902 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HPS1Q92902 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
HPS1Q92902 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HPS1Q92902 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.73■□□□□ 0.27
HPS1Q92902 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS1Q92902 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.73■□□□□ 0.27
HPS1Q92902 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
HPS1Q92902 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
HPS1Q92902 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.72■□□□□ 0.27
HPS1Q92902 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.72■□□□□ 0.27
HPS1Q92902 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.72■□□□□ 0.27
HPS1Q92902 AC120057.1-201ENST00000483947 663 ntBASIC16.72■□□□□ 0.27
HPS1Q92902 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.72■□□□□ 0.27
HPS1Q92902 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.72■□□□□ 0.27
HPS1Q92902 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HPS1Q92902 LINC01023-201ENST00000606054 436 ntBASIC16.72■□□□□ 0.27
HPS1Q92902 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
HPS1Q92902 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HPS1Q92902 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.72■□□□□ 0.27
HPS1Q92902 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.72■□□□□ 0.27
HPS1Q92902 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HPS1Q92902 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HPS1Q92902 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HPS1Q92902 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.72■□□□□ 0.27
HPS1Q92902 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
HPS1Q92902 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 AL512353.2-201ENST00000448759 1962 ntBASIC16.71■□□□□ 0.27
HPS1Q92902 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.71■□□□□ 0.27
HPS1Q92902 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HPS1Q92902 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HPS1Q92902 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.71■□□□□ 0.27
HPS1Q92902 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.71■□□□□ 0.27
HPS1Q92902 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.71■□□□□ 0.27
HPS1Q92902 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 AC244517.3-201ENST00000616254 1235 ntBASIC16.71■□□□□ 0.27
HPS1Q92902 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.71■□□□□ 0.27
HPS1Q92902 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HPS1Q92902 AP001271.2-201ENST00000624018 1556 ntBASIC16.71■□□□□ 0.27
HPS1Q92902 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.71■□□□□ 0.27
HPS1Q92902 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.71■□□□□ 0.27
HPS1Q92902 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HPS1Q92902 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
HPS1Q92902 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
HPS1Q92902 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
HPS1Q92902 PCDH8P1-201ENST00000428983 2773 ntBASIC16.71■□□□□ 0.26
HPS1Q92902 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS1Q92902 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms