Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 AL596442.2-201ENST00000610240 980 ntBASIC31.25■■■□□ 2.59
TRIM41Q8WV44 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 LINC00167-201ENST00000530583 1419 ntBASIC31.24■■■□□ 2.59
TRIM41Q8WV44 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 PTMS-202ENST00000389462 773 ntTSL 2 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 MIR7706-201ENST00000613747 67 ntBASIC31.24■■■□□ 2.59
TRIM41Q8WV44 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 AC093525.10-201ENST00000625130 1569 ntBASIC31.24■■■□□ 2.59
TRIM41Q8WV44 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM41Q8WV44 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 SPCS2P1-201ENST00000561636 679 ntBASIC31.23■■■□□ 2.59
TRIM41Q8WV44 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC31.23■■■□□ 2.59
TRIM41Q8WV44 AC027601.4-201ENST00000611259 610 ntBASIC31.23■■■□□ 2.59
TRIM41Q8WV44 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 DNAJB3-201ENST00000446806 729 ntBASIC31.22■■■□□ 2.59
TRIM41Q8WV44 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
TRIM41Q8WV44 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 MIR662-201ENST00000384847 95 ntBASIC31.21■■■□□ 2.59
TRIM41Q8WV44 LSM5-204ENST00000409909 740 ntTSL 2 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 PON3-203ENST00000427422 894 ntTSL 3 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 ORC5-208ENST00000626700 344 ntTSL 3 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM41Q8WV44 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 MED15P5-201ENST00000423150 992 ntBASIC31.2■■■□□ 2.59
TRIM41Q8WV44 RBM7-207ENST00000544582 692 ntTSL 3 BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC31.2■■■□□ 2.59
TRIM41Q8WV44 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC31.2■■■□□ 2.58
TRIM41Q8WV44 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC31.2■■■□□ 2.58
TRIM41Q8WV44 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
TRIM41Q8WV44 PBK-203ENST00000522944 1499 ntTSL 2 BASIC31.2■■■□□ 2.58
TRIM41Q8WV44 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TRIM41Q8WV44 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
TRIM41Q8WV44 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 AC099343.3-201ENST00000605834 2503 ntBASIC31.19■■■□□ 2.58
TRIM41Q8WV44 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
TRIM41Q8WV44 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms