Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 AC008608.2-201ENST00000606089 416 ntBASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 AC004408.2-201ENST00000623613 2777 ntBASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 HOXB1-202ENST00000577092 1414 ntBASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 AC098831.1-202ENST00000438821 336 ntBASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 FAM215A-202ENST00000632077 792 ntBASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.87■□□□□ 0.93
U2AF1L4Q8WU68 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 UPF3AP3-201ENST00000420996 769 ntBASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 AC011840.4-201ENST00000578471 627 ntBASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 AP001160.2-201ENST00000596071 487 ntBASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
U2AF1L4Q8WU68 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 BNIP3P18-201ENST00000593976 575 ntBASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 SDHAP1-207ENST00000440850 2000 ntBASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2AF1L4Q8WU68 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2AF1L4Q8WU68 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms