Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 PHGDH-209ENST00000641074 1780 ntBASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 AC093677.2-201ENST00000600169 1863 ntBASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 TSPY22P-201ENST00000427496 604 ntBASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 AL353692.3-201ENST00000407031 1396 ntBASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAM1L1Q8N609 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 AC104581.1-202ENST00000635932 2618 ntBASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 KRT8P26-201ENST00000534154 1276 ntBASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 AL121672.3-201ENST00000608644 468 ntBASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAM1L1Q8N609 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 BX276092.5-203ENST00000456199 560 ntBASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRAM1L1Q8N609 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TRAM1L1Q8N609 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.02■□□□□ 0.47
TRAM1L1Q8N609 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.02■□□□□ 0.47
TRAM1L1Q8N609 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAM1L1Q8N609 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAM1L1Q8N609 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAM1L1Q8N609 AC135776.1-201ENST00000319817 2481 ntBASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 AC093010.1-201ENST00000473625 1624 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms