Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 AC011767.1-201ENST00000617410 1153 ntBASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 OR10C1-204ENST00000622521 1039 ntBASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 KRT8P8-201ENST00000434750 1448 ntBASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD2Q8IV50 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 MIR638-201ENST00000385237 100 ntBASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD2Q8IV50 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 AC137761.2-201ENST00000561729 223 ntBASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 AC145350.3-201ENST00000569033 163 ntBASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LYSMD2Q8IV50 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms