Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.52□□□□□ -0.258e-15■■□□□ 11.6
LARP4Q71RC2 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.948e-15■■□□□ 11.6
LARP4Q71RC2 AC005726.2-201ENST00000481916 2091 ntTSL 1 (best)21.11■□□□□ 0.974e-10■■□□□ 11.6
LARP4Q71RC2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.494e-10■■□□□ 11.6
LARP4Q71RC2 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC11.57□□□□□ -0.564e-10■■□□□ 11.6
LARP4Q71RC2 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.564e-10■■□□□ 11.6
LARP4Q71RC2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.084e-10■■□□□ 11.6
LARP4Q71RC2 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC13.41□□□□□ -0.264e-10■■□□□ 11.6
LARP4Q71RC2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.71e-20■■□□□ 11.6
LARP4Q71RC2 ETFB-203ENST00000593992 603 ntTSL 214.24□□□□□ -0.131e-20■■□□□ 11.6
LARP4Q71RC2 SNRNP200-208ENST00000497539 2666 ntTSL 1 (best)11.34□□□□□ -0.598e-7■■□□□ 11.6
LARP4Q71RC2 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.758e-7■■□□□ 11.6
LARP4Q71RC2 AURKAIP1-206ENST00000496905 608 ntTSL 216.49■□□□□ 0.232e-6■■□□□ 11.6
LARP4Q71RC2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.552e-10■■□□□ 11.6
LARP4Q71RC2 NDUFA3-213ENST00000484103 541 ntTSL 1 (best)17.49■□□□□ 0.391e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.54■□□□□ 0.081e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-206ENST00000419113 654 ntTSL 315.52■□□□□ 0.081e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.92□□□□□ -0.021e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.45□□□□□ -0.11e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-205ENST00000417903 666 ntTSL 313.9□□□□□ -0.181e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.561e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-209ENST00000451517 445 ntTSL 1 (best)10.92□□□□□ -0.661e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-210ENST00000471292 646 ntTSL 2 BASIC10.92□□□□□ -0.661e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-208ENST00000422029 694 ntTSL 310.3□□□□□ -0.761e-7■■□□□ 11.6
LARP4Q71RC2 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC8.48□□□□□ -1.051e-7■■□□□ 11.6
LARP4Q71RC2 RPS10-203ENST00000464218 615 ntTSL 511.7□□□□□ -0.541e-10■■□□□ 11.6
LARP4Q71RC2 RPS10-206ENST00000494077 781 ntTSL 210.85□□□□□ -0.671e-10■■□□□ 11.6
LARP4Q71RC2 RPS10-204ENST00000467531 777 ntTSL 210.54□□□□□ -0.721e-10■■□□□ 11.6
LARP4Q71RC2 RPS10-202ENST00000344700 650 ntTSL 3 BASIC9.14□□□□□ -0.951e-10■■□□□ 11.6
LARP4Q71RC2 RPS10-NUDT3-201ENST00000605528 595 ntTSL 56.25□□□□□ -1.411e-10■■□□□ 11.6
LARP4Q71RC2 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.9□□□□□ -0.997e-7■■□□□ 11.6
LARP4Q71RC2 EMILIN1-202ENST00000433140 1431 ntTSL 219.03■□□□□ 0.648e-10■■□□□ 11.6
LARP4Q71RC2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.354e-7■■□□□ 11.6
LARP4Q71RC2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.45■□□□□ 0.224e-7■■□□□ 11.6
LARP4Q71RC2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.228e-10■■□□□ 11.6
LARP4Q71RC2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.318e-10■■□□□ 11.6
LARP4Q71RC2 MYL6B-201ENST00000405661 1258 ntTSL 212.97□□□□□ -0.336e-7■■□□□ 11.6
LARP4Q71RC2 SLC3A2-205ENST00000457660 873 ntTSL 511.53□□□□□ -0.568e-10■■□□□ 11.6
LARP4Q71RC2 MYL6B-204ENST00000549178 971 ntTSL 511.05□□□□□ -0.646e-7■■□□□ 11.6
LARP4Q71RC2 MYL6B-211ENST00000553066 1305 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.666e-7■■□□□ 11.6
LARP4Q71RC2 MYL6B-206ENST00000550152 639 ntTSL 310.66□□□□□ -0.76e-7■■□□□ 11.6
LARP4Q71RC2 TGFBI-209ENST00000509485 731 ntTSL 310.66□□□□□ -0.74e-6■■□□□ 11.6
LARP4Q71RC2 TGFBI-212ENST00000514242 574 ntTSL 210.3□□□□□ -0.764e-6■■□□□ 11.6
LARP4Q71RC2 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC10.28□□□□□ -0.766e-7■■□□□ 11.6
LARP4Q71RC2 MYL6B-207ENST00000550443 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.776e-7■■□□□ 11.6
LARP4Q71RC2 SLC3A2-217ENST00000541425 595 ntTSL 510.13□□□□□ -0.798e-10■■□□□ 11.6
LARP4Q71RC2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.32■□□□□ 0.682e-7■■□□□ 11.6
LARP4Q71RC2 HCFC1R1-209ENST00000576921 1199 ntTSL 1 (best)19.32■□□□□ 0.682e-7■■□□□ 11.6
LARP4Q71RC2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.32■□□□□ 0.682e-7■■□□□ 11.6
LARP4Q71RC2 HCFC1R1-208ENST00000575214 1365 ntTSL 218.98■□□□□ 0.632e-7■■□□□ 11.6
LARP4Q71RC2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.5■□□□□ 0.552e-7■■□□□ 11.6
LARP4Q71RC2 HCFC1R1-204ENST00000573095 828 ntTSL 317.55■□□□□ 0.42e-7■■□□□ 11.6
LARP4Q71RC2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.49□□□□□ -0.092e-7■■□□□ 11.6
LARP4Q71RC2 HCFC1R1-206ENST00000574151 618 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.872e-7■■□□□ 11.6
LARP4Q71RC2 CD7-203ENST00000581434 572 ntTSL 318.56■□□□□ 0.564e-7■■□□□ 11.6
LARP4Q71RC2 CD7-204ENST00000581744 990 ntTSL 216.42■□□□□ 0.224e-7■■□□□ 11.6
LARP4Q71RC2 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.53■□□□□ 0.084e-7■■□□□ 11.6
LARP4Q71RC2 POLR2E-203ENST00000586215 756 ntTSL 213.5□□□□□ -0.258e-9■■□□□ 11.6
LARP4Q71RC2 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.234e-6■■□□□ 11.6
LARP4Q71RC2 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.254e-6■■□□□ 11.6
LARP4Q71RC2 TNRC6A-207ENST00000491718 7956 ntTSL 1 (best)6.35□□□□□ -1.394e-6■■□□□ 11.6
LARP4Q71RC2 FGFR4-215ENST00000513423 445 ntTSL 212.64□□□□□ -0.393e-15■■□□□ 11.6
LARP4Q71RC2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.14■□□□□ 0.816e-7■■□□□ 11.6
LARP4Q71RC2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.91■□□□□ 0.33e-8■■□□□ 11.6
LARP4Q71RC2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.233e-8■■□□□ 11.6
LARP4Q71RC2 ILVBL-206ENST00000533086 4248 ntTSL 210.7□□□□□ -0.73e-8■■□□□ 11.6
LARP4Q71RC2 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.355e-11■■□□□ 11.6
LARP4Q71RC2 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.815e-11■■□□□ 11.6
LARP4Q71RC2 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.865e-11■■□□□ 11.6
LARP4Q71RC2 RPS10-201ENST00000326199 644 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.875e-11■■□□□ 11.6
LARP4Q71RC2 QPRT-201ENST00000219771 913 ntTSL 216.28■□□□□ 0.26e-7■■□□□ 11.6
LARP4Q71RC2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.58■□□□□ 0.086e-7■■□□□ 11.6
LARP4Q71RC2 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.56□□□□□ -0.42e-10■■□□□ 11.6
LARP4Q71RC2 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.542e-10■■□□□ 11.6
LARP4Q71RC2 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)11.66□□□□□ -0.542e-10■■□□□ 11.6
LARP4Q71RC2 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC10.58□□□□□ -0.722e-10■■□□□ 11.6
LARP4Q71RC2 NME1-208ENST00000487481 987 ntTSL 213.59□□□□□ -0.232e-9■■□□□ 11.5
LARP4Q71RC2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.05□□□□□ -0.326e-7■■□□□ 11.5
LARP4Q71RC2 CCDC144NL-AS1-205ENST00000439794 481 ntTSL 313.05□□□□□ -0.326e-7■■□□□ 11.5
LARP4Q71RC2 CCDC144NL-AS1-207ENST00000577537 3727 ntTSL 2 BASIC11.12□□□□□ -0.636e-7■■□□□ 11.5
LARP4Q71RC2 CCDC144NL-AS1-218ENST00000583962 3352 ntTSL 1 (best)10.35□□□□□ -0.756e-7■■□□□ 11.5
LARP4Q71RC2 CCDC144NL-AS1-215ENST00000582324 756 ntTSL 39.76□□□□□ -0.856e-7■■□□□ 11.5
LARP4Q71RC2 CCDC144NL-AS1-201ENST00000417232 709 ntTSL 36.11□□□□□ -1.436e-7■■□□□ 11.5
LARP4Q71RC2 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.51e-323■■□□□ 11.5
LARP4Q71RC2 TF-204ENST00000461695 990 ntTSL 39.44□□□□□ -0.91e-323■■□□□ 11.5
LARP4Q71RC2 TF-207ENST00000467842 4602 ntTSL 1 (best)6.67□□□□□ -1.341e-323■■□□□ 11.5
LARP4Q71RC2 LDHB-202ENST00000396075 744 ntTSL 37.71□□□□□ -1.184e-7■■□□□ 11.5
LARP4Q71RC2 TGFBI-206ENST00000507018 2469 ntTSL 512.41□□□□□ -0.421e-6■■□□□ 11.5
LARP4Q71RC2 FBXO7-204ENST00000425028 1921 ntTSL 520.32■□□□□ 0.843e-7■■□□□ 11.5
LARP4Q71RC2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.373e-7■■□□□ 11.5
LARP4Q71RC2 FBXO7-203ENST00000420700 1900 ntTSL 517.19■□□□□ 0.343e-7■■□□□ 11.5
LARP4Q71RC2 FBXO7-209ENST00000492535 6884 ntTSL 57.76□□□□□ -1.173e-7■■□□□ 11.5
LARP4Q71RC2 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.65□□□□□ -1.343e-7■■□□□ 11.5
LARP4Q71RC2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.22e-7■■□□□ 11.5
LARP4Q71RC2 RFNG-207ENST00000580953 2082 ntTSL 518.94■□□□□ 0.622e-7■■□□□ 11.5
LARP4Q71RC2 RFNG-205ENST00000580793 1755 ntTSL 1 (best)16.84■□□□□ 0.292e-7■■□□□ 11.5
LARP4Q71RC2 RFNG-208ENST00000582478 3107 ntTSL 1 (best)15.82■□□□□ 0.122e-7■■□□□ 11.5
LARP4Q71RC2 RFNG-209ENST00000583784 2886 nt14.7□□□□□ -0.062e-7■■□□□ 11.5
LARP4Q71RC2 METTL26-206ENST00000448973 1710 ntTSL 1 (best)22.66■■□□□ 1.225e-7■■□□□ 11.5
LARP4Q71RC2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.08■□□□□ 0.645e-7■■□□□ 11.5
Retrieved 100 of 15,922 protein–RNA pairs in 101.1 ms