RNA–Protein interactions for RNA: ENST00000583784.1

RFNG-209, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

Gene RFNG, Length 2,886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-209ENST00000583784 NISCHQ9Y2I1 1504 aa30.99■■■□□ 2.55
RFNG-209ENST00000583784 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
RFNG-209ENST00000583784 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
RFNG-209ENST00000583784 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
RFNG-209ENST00000583784 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
RFNG-209ENST00000583784 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
RFNG-209ENST00000583784 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
RFNG-209ENST00000583784 HRCP23327 699 aa24.85■■□□□ 1.57
RFNG-209ENST00000583784 ABCC9O60706 1549 aa24.85■■□□□ 1.57
RFNG-209ENST00000583784 SCRIBQ14160 1630 aa24.83■■□□□ 1.56
RFNG-209ENST00000583784 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
RFNG-209ENST00000583784 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
RFNG-209ENST00000583784 NACADO15069 1562 aa24.58■■□□□ 1.53
RFNG-209ENST00000583784 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
RFNG-209ENST00000583784 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
RFNG-209ENST00000583784 PPARGC1BQ86YN6 1023 aaKnown RBP24.29■■□□□ 1.48
RFNG-209ENST00000583784 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
RFNG-209ENST00000583784 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.46
RFNG-209ENST00000583784 PELP1Q8IZL8 1130 aaKnown RBP24.11■■□□□ 1.45
RFNG-209ENST00000583784 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
RFNG-209ENST00000583784 WIZO95785 1651 aa23.96■■□□□ 1.43
RFNG-209ENST00000583784 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
RFNG-209ENST00000583784 LOC105371045A0A1W2PR82 267 aa23.92■■□□□ 1.42
RFNG-209ENST00000583784 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
RFNG-209ENST00000583784 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
RFNG-209ENST00000583784 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
RFNG-209ENST00000583784 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.382e-8■□□□□ 10.2
RFNG-209ENST00000583784 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
RFNG-209ENST00000583784 BICRAQ9NZM4 1560 aa23.6■■□□□ 1.37
RFNG-209ENST00000583784 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
RFNG-209ENST00000583784 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
RFNG-209ENST00000583784 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
RFNG-209ENST00000583784 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
RFNG-209ENST00000583784 EHMT2Q96KQ7 1210 aa23.46■■□□□ 1.35
RFNG-209ENST00000583784 CCDC88BA6NC98 1476 aa23.45■■□□□ 1.34
RFNG-209ENST00000583784 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
RFNG-209ENST00000583784 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
RFNG-209ENST00000583784 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
RFNG-209ENST00000583784 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
RFNG-209ENST00000583784 MYT1Q01538 1121 aa23.2■■□□□ 1.3
RFNG-209ENST00000583784 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
RFNG-209ENST00000583784 BAZ1BQ9UIG0 1483 aaKnown RBP23.08■■□□□ 1.29
RFNG-209ENST00000583784 SOGA1O94964 1423 aa23.01■■□□□ 1.27
RFNG-209ENST00000583784 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
RFNG-209ENST00000583784 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
RFNG-209ENST00000583784 RUSC2Q8N2Y8 1516 aa22.91■■□□□ 1.26
RFNG-209ENST00000583784 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
RFNG-209ENST00000583784 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
RFNG-209ENST00000583784 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.25
RFNG-209ENST00000583784 EEA1Q15075 1411 aa22.82■■□□□ 1.24
RFNG-209ENST00000583784 GTF3C3Q9Y5Q9 886 aa22.77■■□□□ 1.24
RFNG-209ENST00000583784 CEP162Q5TB80 1403 aa22.75■■□□□ 1.23
RFNG-209ENST00000583784 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
RFNG-209ENST00000583784 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
RFNG-209ENST00000583784 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
RFNG-209ENST00000583784 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
RFNG-209ENST00000583784 CENPBP07199 599 aaPredicted RBP22.68■■□□□ 1.22
RFNG-209ENST00000583784 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
RFNG-209ENST00000583784 TTBK1Q5TCY1 1321 aaPredicted RBP22.62■■□□□ 1.21
RFNG-209ENST00000583784 TOP2BQ02880 1626 aa22.59■■□□□ 1.21
RFNG-209ENST00000583784 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
RFNG-209ENST00000583784 DIEXFQ68CQ4 756 aaKnown RBP22.55■■□□□ 1.2
RFNG-209ENST00000583784 KIF21BO75037 1637 aa22.54■■□□□ 1.2
RFNG-209ENST00000583784 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
RFNG-209ENST00000583784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
RFNG-209ENST00000583784 CCER1Q8TC90 406 aaPredicted RBP22.49■■□□□ 1.19
RFNG-209ENST00000583784 CFTRP13569 1480 aa22.47■■□□□ 1.19
RFNG-209ENST00000583784 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
RFNG-209ENST00000583784 CUX1P39880 1505 aa22.45■■□□□ 1.18
RFNG-209ENST00000583784 RANGAP1P46060 587 aaPredicted RBP22.41■■□□□ 1.18
RFNG-209ENST00000583784 CLIP1P30622 1438 aa22.4■■□□□ 1.18
RFNG-209ENST00000583784 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
RFNG-209ENST00000583784 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
RFNG-209ENST00000583784 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
RFNG-209ENST00000583784 PRXQ9BXM0 1461 aa22.26■■□□□ 1.15
RFNG-209ENST00000583784 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
RFNG-209ENST00000583784 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
RFNG-209ENST00000583784 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
RFNG-209ENST00000583784 APLP2Q06481 763 aa22.16■■□□□ 1.14
RFNG-209ENST00000583784 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
RFNG-209ENST00000583784 CUX2O14529 1486 aa22.13■■□□□ 1.13
RFNG-209ENST00000583784 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
RFNG-209ENST00000583784 ZNF316A6NFI3 1004 aaPredicted RBP22.11■■□□□ 1.13
RFNG-209ENST00000583784 FANCD2Q9BXW9 1451 aa22.08■■□□□ 1.13
RFNG-209ENST00000583784 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
RFNG-209ENST00000583784 NESP48681 1621 aa22.05■■□□□ 1.12
RFNG-209ENST00000583784 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
RFNG-209ENST00000583784 IGF1RP08069 1367 aa22.02■■□□□ 1.12
RFNG-209ENST00000583784 MIER1Q8N108 512 aa21.96■■□□□ 1.11
RFNG-209ENST00000583784 CARMIL1Q5VZK9 1371 aa21.94■■□□□ 1.1
RFNG-209ENST00000583784 ARHGAP35Q9NRY4 1499 aa21.94■■□□□ 1.1
RFNG-209ENST00000583784 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
RFNG-209ENST00000583784 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
RFNG-209ENST00000583784 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
RFNG-209ENST00000583784 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
RFNG-209ENST00000583784 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
RFNG-209ENST00000583784 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
RFNG-209ENST00000583784 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
RFNG-209ENST00000583784 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
RFNG-209ENST00000583784 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms