RNA–Protein interactions for RNA: ENST00000582478.5

RFNG-208, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best)

Gene RFNG, Length 3,107 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-208ENST00000582478 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
RFNG-208ENST00000582478 PELP1Q8IZL8 1130 aaKnown RBP27.95■■■□□ 2.06
RFNG-208ENST00000582478 HRCP23327 699 aa27.63■■■□□ 2.01
RFNG-208ENST00000582478 PPARGC1BQ86YN6 1023 aaKnown RBP27.52■■■□□ 2
RFNG-208ENST00000582478 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
RFNG-208ENST00000582478 DCAF8L2P0C7V8 631 aa27.3■■□□□ 1.96
RFNG-208ENST00000582478 MYT1Q01538 1121 aa27.03■■□□□ 1.92
RFNG-208ENST00000582478 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
RFNG-208ENST00000582478 SCAF1Q9H7N4 1312 aaKnown RBP26.91■■□□□ 1.9
RFNG-208ENST00000582478 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
RFNG-208ENST00000582478 ZCCHC6Q5VYS8 1495 aaKnown RBP25.99■■□□□ 1.75
RFNG-208ENST00000582478 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.73
RFNG-208ENST00000582478 GTF3C3Q9Y5Q9 886 aa25.88■■□□□ 1.73
RFNG-208ENST00000582478 NEUROD1Q13562 356 aa25.86■■□□□ 1.73
RFNG-208ENST00000582478 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
RFNG-208ENST00000582478 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.71
RFNG-208ENST00000582478 BCL11AQ9H165 835 aa25.72■■□□□ 1.71
RFNG-208ENST00000582478 FAM9AQ8IZU1 332 aaPredicted RBP25.55■■□□□ 1.68
RFNG-208ENST00000582478 ABCC9O60706 1549 aa25.51■■□□□ 1.67
RFNG-208ENST00000582478 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
RFNG-208ENST00000582478 PRKCSHP14314 528 aaPredicted RBP25.48■■□□□ 1.67
RFNG-208ENST00000582478 CENPBP07199 599 aaPredicted RBP25.41■■□□□ 1.66
RFNG-208ENST00000582478 TRIM26Q12899 539 aaPredicted RBP25.39■■□□□ 1.65
RFNG-208ENST00000582478 ZEB1P37275 1124 aaPredicted RBP25.36■■□□□ 1.65
RFNG-208ENST00000582478 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
RFNG-208ENST00000582478 LOC105371045A0A1W2PR82 267 aa25.28■■□□□ 1.64
RFNG-208ENST00000582478 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
RFNG-208ENST00000582478 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
RFNG-208ENST00000582478 YTHDC1Q96MU7 727 aaKnown RBP25.08■■□□□ 1.61
RFNG-208ENST00000582478 DCAF1Q9Y4B6 1507 aa24.99■■□□□ 1.59
RFNG-208ENST00000582478 DIEXFQ68CQ4 756 aaKnown RBP24.91■■□□□ 1.58
RFNG-208ENST00000582478 ANP32EQ9BTT0 268 aa24.89■■□□□ 1.57
RFNG-208ENST00000582478 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
RFNG-208ENST00000582478 PABPN1Q86U42 306 aaKnown RBP eCLIP24.71■■□□□ 1.552e-8■□□□□ 10.2
RFNG-208ENST00000582478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.63■■□□□ 1.53
RFNG-208ENST00000582478 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
RFNG-208ENST00000582478 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
RFNG-208ENST00000582478 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
RFNG-208ENST00000582478 ERICH6Q7L0X2 663 aa24.54■■□□□ 1.52
RFNG-208ENST00000582478 CCER1Q8TC90 406 aaPredicted RBP24.53■■□□□ 1.52
RFNG-208ENST00000582478 TSHZ2Q9NRE2 1034 aa24.39■■□□□ 1.49
RFNG-208ENST00000582478 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
RFNG-208ENST00000582478 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
RFNG-208ENST00000582478 NACADO15069 1562 aa24.27■■□□□ 1.48
RFNG-208ENST00000582478 APLP2Q06481 763 aa24.24■■□□□ 1.47
RFNG-208ENST00000582478 MIER1Q8N108 512 aa24.23■■□□□ 1.47
RFNG-208ENST00000582478 SUPT16HQ9Y5B9 1047 aaKnown RBP24.2■■□□□ 1.46
RFNG-208ENST00000582478 ANO8Q9HCE9 1232 aaPredicted RBP24.19■■□□□ 1.46
RFNG-208ENST00000582478 WIZO95785 1651 aa24.14■■□□□ 1.46
RFNG-208ENST00000582478 ZNF316A6NFI3 1004 aaPredicted RBP24.03■■□□□ 1.44
RFNG-208ENST00000582478 BCANQ96GW7 911 aa24.03■■□□□ 1.44
RFNG-208ENST00000582478 RANGAP1P46060 587 aaPredicted RBP23.92■■□□□ 1.42
RFNG-208ENST00000582478 CCDC136Q96JN2 1154 aa23.89■■□□□ 1.42
RFNG-208ENST00000582478 SALL2Q9Y467 1007 aaPredicted RBP23.77■■□□□ 1.4
RFNG-208ENST00000582478 RBM19Q9Y4C8 960 aaKnown RBP23.75■■□□□ 1.39
RFNG-208ENST00000582478 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
RFNG-208ENST00000582478 BAZ1AQ9NRL2 1556 aaPredicted RBP23.71■■□□□ 1.39
RFNG-208ENST00000582478 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
RFNG-208ENST00000582478 MSH5O43196 834 aa23.66■■□□□ 1.38
RFNG-208ENST00000582478 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
RFNG-208ENST00000582478 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
RFNG-208ENST00000582478 DEKP35659 375 aaKnown RBP23.59■■□□□ 1.37
RFNG-208ENST00000582478 SMARCA4P51532 1647 aa23.58■■□□□ 1.37
RFNG-208ENST00000582478 ITGAEP38570 1179 aa23.58■■□□□ 1.37
RFNG-208ENST00000582478 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.58■■□□□ 1.37
RFNG-208ENST00000582478 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
RFNG-208ENST00000582478 FKBP8Q14318 412 aa23.53■■□□□ 1.36
RFNG-208ENST00000582478 SOGA1O94964 1423 aa23.51■■□□□ 1.35
RFNG-208ENST00000582478 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
RFNG-208ENST00000582478 RTN4Q9NQC3 1192 aaKnown RBP23.48■■□□□ 1.35
RFNG-208ENST00000582478 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
RFNG-208ENST00000582478 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
RFNG-208ENST00000582478 SMARCA2P51531 1590 aa23.39■■□□□ 1.34
RFNG-208ENST00000582478 UBE2Q2Q8WVN8 375 aa23.35■■□□□ 1.33
RFNG-208ENST00000582478 NBR1Q14596 966 aa23.31■■□□□ 1.32
RFNG-208ENST00000582478 BAZ1BQ9UIG0 1483 aaKnown RBP23.27■■□□□ 1.32
RFNG-208ENST00000582478 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
RFNG-208ENST00000582478 IL27Q8NEV9 243 aa23.23■■□□□ 1.31
RFNG-208ENST00000582478 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
RFNG-208ENST00000582478 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
RFNG-208ENST00000582478 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.3
RFNG-208ENST00000582478 NEFLP07196 543 aa23.17■■□□□ 1.3
RFNG-208ENST00000582478 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
RFNG-208ENST00000582478 EIF4G1Q04637 1599 aaKnown RBP23.12■■□□□ 1.29
RFNG-208ENST00000582478 CEP162Q5TB80 1403 aa23.09■■□□□ 1.29
RFNG-208ENST00000582478 PLEKHG5O94827 1062 aa23.07■■□□□ 1.28
RFNG-208ENST00000582478 MYT1LQ9UL68 1186 aa23.06■■□□□ 1.28
RFNG-208ENST00000582478 PKNOX2Q96KN3 472 aa23.02■■□□□ 1.28
RFNG-208ENST00000582478 ERICH6BQ5W0A0 696 aa23.02■■□□□ 1.27
RFNG-208ENST00000582478 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
RFNG-208ENST00000582478 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
RFNG-208ENST00000582478 IRX6P78412 446 aaPredicted RBP22.95■■□□□ 1.26
RFNG-208ENST00000582478 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
RFNG-208ENST00000582478 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
RFNG-208ENST00000582478 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.26
RFNG-208ENST00000582478 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
RFNG-208ENST00000582478 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
RFNG-208ENST00000582478 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.24
RFNG-208ENST00000582478 P3H3Q8IVL6 736 aa22.82■■□□□ 1.24
RFNG-208ENST00000582478 RTL5Q5HYW3 569 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms