Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AP000550.4-202ENST00000639755 178 ntBASIC20■□□□□ 0.79
NCKAP1LP55160 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20■□□□□ 0.79
NCKAP1LP55160 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20■□□□□ 0.79
NCKAP1LP55160 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 AL096828.2-201ENST00000567259 1965 ntBASIC19.99■□□□□ 0.79
NCKAP1LP55160 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 IER3-202ENST00000376377 1350 ntBASIC19.99■□□□□ 0.79
NCKAP1LP55160 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.99■□□□□ 0.79
NCKAP1LP55160 Z83836.1-201ENST00000624605 1642 ntBASIC19.99■□□□□ 0.79
NCKAP1LP55160 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 AC011498.5-201ENST00000592027 486 ntBASIC19.99■□□□□ 0.79
NCKAP1LP55160 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NCKAP1LP55160 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1LP55160 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.98■□□□□ 0.79
NCKAP1LP55160 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NCKAP1LP55160 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.98■□□□□ 0.79
NCKAP1LP55160 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.98■□□□□ 0.79
NCKAP1LP55160 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.98■□□□□ 0.79
NCKAP1LP55160 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.98■□□□□ 0.79
NCKAP1LP55160 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.98■□□□□ 0.79
NCKAP1LP55160 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1LP55160 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
NCKAP1LP55160 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 AC132938.6-201ENST00000623828 1655 ntBASIC19.97■□□□□ 0.79
NCKAP1LP55160 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 AC135050.7-201ENST00000624508 2218 ntBASIC19.97■□□□□ 0.79
NCKAP1LP55160 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.97■□□□□ 0.79
NCKAP1LP55160 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1LP55160 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.96■□□□□ 0.79
NCKAP1LP55160 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 AL353692.3-201ENST00000407031 1396 ntBASIC19.96■□□□□ 0.79
NCKAP1LP55160 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.96■□□□□ 0.79
NCKAP1LP55160 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.96■□□□□ 0.79
NCKAP1LP55160 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
NCKAP1LP55160 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKAP1LP55160 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms