Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 GRIPAP1-208ENST00000611705 553 ntTSL 47.31□□□□□ -1.241e-6■■■□□ 16.1
MATR3P43243 SLX4IP-202ENST00000488816 597 ntTSL 56.15□□□□□ -1.425e-8■■■□□ 16.1
MATR3P43243 TFB1M-203ENST00000468889 621 ntTSL 34.59□□□□□ -1.673e-15■■■□□ 16.1
MATR3P43243 TFB1M-208ENST00000489874 563 ntTSL 33.18□□□□□ -1.93e-15■■■□□ 16.1
MATR3P43243 IGF1R-203ENST00000557938 574 ntTSL 410.77□□□□□ -0.696e-7■■■□□ 16.1
MATR3P43243 ZFHX2-AS1-202ENST00000554403 2524 ntTSL 216.55■□□□□ 0.243e-6■■■□□ 16.1
MATR3P43243 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC14.03□□□□□ -0.163e-6■■■□□ 16.1
MATR3P43243 ZFHX2-AS1-203ENST00000556354 931 ntTSL 3 BASIC11.25□□□□□ -0.613e-6■■■□□ 16.1
MATR3P43243 CDK6-204ENST00000473078 386 ntTSL 21.88□□□□□ -2.111e-7■■■□□ 16.1
MATR3P43243 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.5■■□□□ 1.352e-6■■■□□ 16.1
MATR3P43243 ZDHHC7-202ENST00000344861 2727 ntTSL 1 (best)18.71■□□□□ 0.592e-6■■■□□ 16.1
MATR3P43243 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.122e-6■■■□□ 16.1
MATR3P43243 UTRN-208ENST00000433557 354 ntTSL 424.18■■□□□ 1.469e-7■■■□□ 16.1
MATR3P43243 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.761e-6■■■□□ 16.1
MATR3P43243 CEP164-204ENST00000527609 585 ntAPPRIS ALT2 TSL 1 (best)23.52■■□□□ 1.369e-7■■■□□ 16.1
MATR3P43243 CEP164-211ENST00000533570 492 ntAPPRIS ALT2 TSL 1 (best)17.39■□□□□ 0.379e-7■■■□□ 16.1
MATR3P43243 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.11■□□□□ 0.332e-6■■■□□ 16.1
MATR3P43243 TXLNGY-206ENST00000459719 2098 ntTSL 216.95■□□□□ 0.33e-7■■■□□ 16.1
MATR3P43243 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC14.43□□□□□ -0.13e-7■■■□□ 16.1
MATR3P43243 TXLNGY-205ENST00000447520 832 ntTSL 214.43□□□□□ -0.13e-7■■■□□ 16.1
MATR3P43243 TXLNGY-208ENST00000538014 2018 ntTSL 211.89□□□□□ -0.513e-7■■■□□ 16.1
MATR3P43243 TXLNGY-203ENST00000445715 1915 ntBASIC10.38□□□□□ -0.753e-7■■■□□ 16.1
MATR3P43243 TXLNGY-204ENST00000447202 2761 ntTSL 28.54□□□□□ -1.043e-7■■■□□ 16.1
MATR3P43243 USP15-212ENST00000549237 791 ntTSL 36.88□□□□□ -1.316e-7■■■□□ 16.1
MATR3P43243 NHSL1-201ENST00000342260 736 ntAPPRIS ALT2 TSL 512.46□□□□□ -0.412e-6■■■□□ 16.1
MATR3P43243 SEH1L-203ENST00000585730 582 ntTSL 219.53■□□□□ 0.722e-8■■■□□ 16.1
MATR3P43243 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.44■□□□□ 0.72e-8■■■□□ 16.1
MATR3P43243 SEH1L-206ENST00000589446 655 ntTSL 518.76■□□□□ 0.592e-8■■■□□ 16.1
MATR3P43243 SEH1L-205ENST00000588251 789 ntTSL 318.5■□□□□ 0.552e-8■■■□□ 16.1
MATR3P43243 SEH1L-204ENST00000587761 863 ntTSL 515.13■□□□□ 0.012e-8■■■□□ 16.1
MATR3P43243 SEH1L-201ENST00000262124 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.242e-8■■■□□ 16.1
MATR3P43243 HIF1A-211ENST00000557446 559 ntTSL 521.64■■□□□ 1.054e-6■■■□□ 16.1
MATR3P43243 METAP1-208ENST00000510209 559 ntTSL 418.49■□□□□ 0.554e-6■■■□□ 16.1
MATR3P43243 METAP1-205ENST00000507537 718 ntTSL 317.18■□□□□ 0.344e-6■■■□□ 16.1
MATR3P43243 SEC14L1-216ENST00000587820 652 ntTSL 316.34■□□□□ 0.214e-6■■■□□ 16.1
MATR3P43243 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.084e-6■■■□□ 16.1
MATR3P43243 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.094e-6■■■□□ 16.1
MATR3P43243 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.194e-6■■■□□ 16.1
MATR3P43243 SEC14L1-224ENST00000589827 1791 ntTSL 213.17□□□□□ -0.34e-6■■■□□ 16.1
MATR3P43243 SEC14L1-212ENST00000585618 2712 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.394e-6■■■□□ 16.1
MATR3P43243 SEC14L1-227ENST00000591437 2828 ntTSL 5 BASIC12.29□□□□□ -0.444e-6■■■□□ 16.1
MATR3P43243 SEC14L1-201ENST00000392476 2957 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.54e-6■■■□□ 16.1
MATR3P43243 SEC14L1-205ENST00000443798 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.514e-6■■■□□ 16.1
MATR3P43243 METAP1-202ENST00000503247 653 ntTSL 511.35□□□□□ -0.594e-6■■■□□ 16.1
MATR3P43243 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.012e-6■■■□□ 16.1
MATR3P43243 SEC14L1-214ENST00000586429 575 ntTSL 58.72□□□□□ -1.014e-6■■■□□ 16.1
MATR3P43243 METAP1-203ENST00000506238 553 ntTSL 48.47□□□□□ -1.054e-6■■■□□ 16.1
MATR3P43243 MSH2-204ENST00000461394 416 ntTSL 37.44□□□□□ -1.221e-7■■■□□ 16.1
MATR3P43243 SEC14L1-213ENST00000586390 566 ntTSL 47.37□□□□□ -1.234e-6■■■□□ 16.1
MATR3P43243 SEC14L1-228ENST00000591786 548 ntTSL 46.41□□□□□ -1.384e-6■■■□□ 16.1
MATR3P43243 METAP1-206ENST00000510107 770 ntTSL 53.67□□□□□ -1.824e-6■■■□□ 16.1
MATR3P43243 HFM1-204ENST00000448819 540 ntTSL 510.14□□□□□ -0.796e-7■■■□□ 16.1
MATR3P43243 HFM1-202ENST00000427444 672 ntTSL 54.02□□□□□ -1.776e-7■■■□□ 16.1
MATR3P43243 HFM1-208ENST00000488023 1699 ntTSL 53.62□□□□□ -1.836e-7■■■□□ 16.1
MATR3P43243 HFM1-207ENST00000481900 2020 ntTSL 53.17□□□□□ -1.96e-7■■■□□ 16.1
MATR3P43243 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.146e-7■■■□□ 16.1
MATR3P43243 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.164e-7■■■□□ 16.1
MATR3P43243 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.994e-7■■■□□ 16.1
MATR3P43243 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.834e-7■■■□□ 16.1
MATR3P43243 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.33■□□□□ 0.057e-11■■■□□ 16.1
MATR3P43243 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.42e-6■■■□□ 16.1
MATR3P43243 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.332e-6■■■□□ 16.1
MATR3P43243 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.332e-6■■■□□ 16.1
MATR3P43243 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC13.27□□□□□ -0.292e-6■■■□□ 16.1
MATR3P43243 NDEL1-217ENST00000583683 1802 ntTSL 219.79■□□□□ 0.761e-6■■■□□ 16.1
MATR3P43243 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.12e-6■■■□□ 16
MATR3P43243 NARS2-202ENST00000525345 861 ntTSL 59.37□□□□□ -0.912e-6■■■□□ 16
MATR3P43243 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.42□□□□□ -1.222e-6■■■□□ 16
MATR3P43243 WDFY3-204ENST00000502713 425 ntTSL 327.14■■□□□ 1.945e-9■■■□□ 16
MATR3P43243 WDFY3-208ENST00000509172 453 ntTSL 320.18■□□□□ 0.825e-9■■■□□ 16
MATR3P43243 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.565e-9■■■□□ 16
MATR3P43243 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.36■□□□□ 0.851e-6■■■□□ 16
MATR3P43243 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.9■□□□□ 0.781e-6■■■□□ 16
MATR3P43243 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.46■□□□□ 0.711e-6■■■□□ 16
MATR3P43243 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.84e-6■■■□□ 16
MATR3P43243 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.124e-6■■■□□ 16
MATR3P43243 MATR3-235ENST00000506147 580 ntTSL 417.28■□□□□ 0.361e-6■■■□□ 16
MATR3P43243 MATR3-239ENST00000514694 587 ntTSL 416.84■□□□□ 0.291e-6■■■□□ 16
MATR3P43243 MATR3-238ENST00000512107 579 ntTSL 415.88■□□□□ 0.131e-6■■■□□ 16
MATR3P43243 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC14.23□□□□□ -0.131e-6■■■□□ 16
MATR3P43243 MATR3-236ENST00000509644 750 ntTSL 313.98□□□□□ -0.171e-6■■■□□ 16
MATR3P43243 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.21e-6■■■□□ 16
MATR3P43243 MATR3-234ENST00000505016 664 ntTSL 213.32□□□□□ -0.281e-6■■■□□ 16
MATR3P43243 MATR3-231ENST00000502394 589 ntTSL 413.19□□□□□ -0.31e-6■■■□□ 16
MATR3P43243 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.981e-6■■■□□ 16
MATR3P43243 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.92□□□□□ -0.981e-6■■■□□ 16
MATR3P43243 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.54□□□□□ -1.361e-6■■■□□ 16
MATR3P43243 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.67□□□□□ -1.828e-7■■■□□ 16
MATR3P43243 RPS6KA3-204ENST00000474266 930 ntTSL 312.82□□□□□ -0.361e-8■■■□□ 16
MATR3P43243 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.41■□□□□ 0.382e-6■■■□□ 16
MATR3P43243 EPB41L2-222ENST00000529709 585 ntTSL 45.09□□□□□ -1.592e-6■■■□□ 16
MATR3P43243 EPB41L2-214ENST00000526983 552 ntTSL 43.9□□□□□ -1.792e-6■■■□□ 16
MATR3P43243 EPB41L2-229ENST00000532499 591 ntTSL 32.72□□□□□ -1.972e-6■■■□□ 16
MATR3P43243 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.512e-7■■■□□ 16
MATR3P43243 CAPZA1-206ENST00000498626 650 ntTSL 58.34□□□□□ -1.072e-7■■■□□ 16
MATR3P43243 CAPZA1-204ENST00000476936 867 ntTSL 36.11□□□□□ -1.432e-7■■■□□ 16
MATR3P43243 CASC19-272ENST00000641991 1360 nt12.53□□□□□ -0.46e-7■■■□□ 16
MATR3P43243 CASC19-230ENST00000641421 1530 ntBASIC11.5□□□□□ -0.576e-7■■■□□ 16
MATR3P43243 CASC19-229ENST00000641418 1373 ntBASIC11.4□□□□□ -0.596e-7■■■□□ 16
MATR3P43243 CASC19-247ENST00000641642 1107 nt11.25□□□□□ -0.616e-7■■■□□ 16
Retrieved 100 of 16,209 protein–RNA pairs in 107.8 ms