Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THRAP10827 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
THRAP10827 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
THRAP10827 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THRAP10827 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
THRAP10827 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.37■□□□□ 0.53
THRAP10827 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THRAP10827 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THRAP10827 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
THRAP10827 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.36■□□□□ 0.53
THRAP10827 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
THRAP10827 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.36■□□□□ 0.53
THRAP10827 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.36■□□□□ 0.53
THRAP10827 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
THRAP10827 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.36■□□□□ 0.53
THRAP10827 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
THRAP10827 AC011558.1-201ENST00000623459 338 ntBASIC18.36■□□□□ 0.53
THRAP10827 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
THRAP10827 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.36■□□□□ 0.53
THRAP10827 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
THRAP10827 AL031432.5-201ENST00000641059 760 ntBASIC18.36■□□□□ 0.53
THRAP10827 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
THRAP10827 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
THRAP10827 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.36■□□□□ 0.53
THRAP10827 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
THRAP10827 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.35■□□□□ 0.53
THRAP10827 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
THRAP10827 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
THRAP10827 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.35■□□□□ 0.53
THRAP10827 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.35■□□□□ 0.53
THRAP10827 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
THRAP10827 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
THRAP10827 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
THRAP10827 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.35■□□□□ 0.53
THRAP10827 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 AL031133.1-201ENST00000406807 723 ntBASIC18.35■□□□□ 0.53
THRAP10827 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.35■□□□□ 0.53
THRAP10827 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.35■□□□□ 0.53
THRAP10827 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
THRAP10827 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
THRAP10827 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
THRAP10827 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.35■□□□□ 0.53
THRAP10827 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.35■□□□□ 0.53
THRAP10827 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.35■□□□□ 0.53
THRAP10827 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
THRAP10827 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
THRAP10827 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THRAP10827 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
THRAP10827 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.34■□□□□ 0.53
THRAP10827 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.34■□□□□ 0.53
THRAP10827 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.34■□□□□ 0.53
THRAP10827 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.34■□□□□ 0.53
THRAP10827 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
THRAP10827 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.34■□□□□ 0.53
THRAP10827 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
THRAP10827 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.34■□□□□ 0.53
THRAP10827 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.34■□□□□ 0.53
THRAP10827 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
THRAP10827 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
THRAP10827 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.34■□□□□ 0.53
THRAP10827 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
THRAP10827 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
THRAP10827 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
THRAP10827 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms