Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.4■□□□□ 0.54
MMP2P08253 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP2P08253 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP2P08253 MIR662-201ENST00000384847 95 ntBASIC18.4■□□□□ 0.54
MMP2P08253 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.4■□□□□ 0.54
MMP2P08253 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.4■□□□□ 0.54
MMP2P08253 AL671277.2-201ENST00000458060 996 ntBASIC18.4■□□□□ 0.54
MMP2P08253 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.4■□□□□ 0.54
MMP2P08253 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.4■□□□□ 0.54
MMP2P08253 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.4■□□□□ 0.54
MMP2P08253 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MMP2P08253 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MMP2P08253 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 LINC00167-201ENST00000530583 1419 ntBASIC18.4■□□□□ 0.54
MMP2P08253 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MMP2P08253 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
MMP2P08253 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MMP2P08253 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
MMP2P08253 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MMP2P08253 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
MMP2P08253 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MMP2P08253 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.39■□□□□ 0.53
MMP2P08253 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP2P08253 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP2P08253 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MMP2P08253 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP2P08253 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP2P08253 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP2P08253 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
MMP2P08253 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MMP2P08253 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP2P08253 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP2P08253 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.39■□□□□ 0.53
MMP2P08253 KRT89P-201ENST00000620027 1478 ntBASIC18.39■□□□□ 0.53
MMP2P08253 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP2P08253 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MMP2P08253 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP2P08253 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MMP2P08253 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MMP2P08253 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP2P08253 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP2P08253 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP2P08253 NTF6B-201ENST00000591913 560 ntBASIC18.38■□□□□ 0.53
MMP2P08253 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP2P08253 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP2P08253 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP2P08253 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MMP2P08253 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP2P08253 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MMP2P08253 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP2P08253 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP2P08253 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP2P08253 AL031133.1-201ENST00000406807 723 ntBASIC18.37■□□□□ 0.53
MMP2P08253 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.37■□□□□ 0.53
MMP2P08253 AC113404.2-201ENST00000507884 177 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms