Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
ZNF253O75346 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF253O75346 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF253O75346 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
ZNF253O75346 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ZNF253O75346 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 AC046158.3-201ENST00000624947 2558 ntBASIC14.27□□□□□ -0.13
ZNF253O75346 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 MTMR9LP-203ENST00000426597 1545 ntBASIC14.26□□□□□ -0.13
ZNF253O75346 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 KRT8P32-201ENST00000512863 1461 ntBASIC14.26□□□□□ -0.13
ZNF253O75346 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.26□□□□□ -0.13
ZNF253O75346 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF253O75346 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF253O75346 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF253O75346 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 KRT17P3-201ENST00000420566 1262 ntBASIC14.26□□□□□ -0.13
ZNF253O75346 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF253O75346 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF253O75346 Z85996.1-201ENST00000494644 937 ntBASIC14.26□□□□□ -0.13
ZNF253O75346 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
ZNF253O75346 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF253O75346 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF253O75346 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF253O75346 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 GNAS-203ENST00000306120 1878 ntBASIC14.26□□□□□ -0.13
ZNF253O75346 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF253O75346 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF253O75346 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF253O75346 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF253O75346 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF253O75346 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF253O75346 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF253O75346 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF253O75346 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 AC008894.3-201ENST00000624324 3103 ntBASIC14.25□□□□□ -0.13
ZNF253O75346 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF253O75346 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 KRT16P5-201ENST00000455284 522 ntBASIC14.25□□□□□ -0.13
ZNF253O75346 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF253O75346 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF253O75346 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 MTDHP1-201ENST00000605323 784 ntBASIC14.25□□□□□ -0.13
ZNF253O75346 AL445675.2-201ENST00000620291 557 ntBASIC14.25□□□□□ -0.13
ZNF253O75346 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF253O75346 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
ZNF253O75346 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.25□□□□□ -0.13
ZNF253O75346 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF253O75346 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms