Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 AL603756.1-201ENST00000606511 2163 ntBASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV20-1A0A075B6N2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 MYC-208ENST00000641036 567 ntBASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
TRBV20-1A0A075B6N2 AC106886.4-201ENST00000623557 2502 ntBASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 LINC02228-204ENST00000642115 2962 ntBASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 AC067930.6-201ENST00000623257 4947 ntBASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 AGGF1P2-201ENST00000426656 2106 ntBASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 AC010980.1-201ENST00000587192 1142 ntBASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRBV20-1A0A075B6N2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 PTBP1P-201ENST00000554374 1601 ntBASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRBV20-1A0A075B6N2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.2□□□□□ -0.46
TRBV20-1A0A075B6N2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV20-1A0A075B6N2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV20-1A0A075B6N2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV20-1A0A075B6N2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.2□□□□□ -0.46
TRBV20-1A0A075B6N2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms