Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 MYC-208ENST00000641036 567 ntBASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 LINC02199-201ENST00000506655 2702 ntBASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAPPC1Q9Y5R8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAPPC1Q9Y5R8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
TRAPPC1Q9Y5R8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRAPPC1Q9Y5R8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 AL365209.1-201ENST00000624418 6473 ntBASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 AC116351.2-201ENST00000606540 1585 ntBASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 KRT16P3-201ENST00000439127 1283 ntBASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAPPC1Q9Y5R8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms