Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.14■□□□□ 0.66
PCDHA3Q9Y5H8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 LINC01126-201ENST00000623515 1646 ntBASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHA3Q9Y5H8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 RBM17P1-201ENST00000453646 1190 ntBASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHA3Q9Y5H8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 AC092338.2-201ENST00000568827 1415 ntBASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 UNC93B2-201ENST00000285383 730 ntBASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHA3Q9Y5H8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHA3Q9Y5H8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms