Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 CRYGFP-201ENST00000418459 633 ntBASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 AC128688.1-201ENST00000487626 519 ntBASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 AC010331.1-201ENST00000611423 582 ntBASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 CYP2D8P-201ENST00000433633 1490 ntBASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGB3Q9Y5G1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 AL390955.1-201ENST00000428694 934 ntBASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 AC008764.6-201ENST00000595909 2069 ntBASIC17.4■□□□□ 0.38
PCDHGB3Q9Y5G1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.39■□□□□ 0.38
PCDHGB3Q9Y5G1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 TMPOP1-202ENST00000424642 1267 ntBASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGB3Q9Y5G1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 AL357033.4-201ENST00000617703 1807 ntBASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB3Q9Y5G1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms