Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17■□□□□ 0.31
TM9SF2Q99805 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 DUX4L26-201ENST00000489078 1255 ntBASIC17■□□□□ 0.31
TM9SF2Q99805 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17■□□□□ 0.31
TM9SF2Q99805 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17■□□□□ 0.31
TM9SF2Q99805 AL445228.2-201ENST00000605589 952 ntBASIC17■□□□□ 0.31
TM9SF2Q99805 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17■□□□□ 0.31
TM9SF2Q99805 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TM9SF2Q99805 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TM9SF2Q99805 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
TM9SF2Q99805 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17■□□□□ 0.31
TM9SF2Q99805 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TM9SF2Q99805 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TM9SF2Q99805 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TM9SF2Q99805 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 ARMC10P1-201ENST00000313754 855 ntBASIC16.99■□□□□ 0.31
TM9SF2Q99805 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 AC104076.2-201ENST00000448912 469 ntBASIC16.99■□□□□ 0.31
TM9SF2Q99805 KRT18P35-201ENST00000510488 1269 ntBASIC16.99■□□□□ 0.31
TM9SF2Q99805 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TM9SF2Q99805 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM9SF2Q99805 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF2Q99805 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF2Q99805 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF2Q99805 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF2Q99805 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 AL139384.1-201ENST00000612143 3047 ntBASIC16.98■□□□□ 0.31
TM9SF2Q99805 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF2Q99805 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF2Q99805 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 AK4P3-201ENST00000418260 669 ntBASIC16.98■□□□□ 0.31
TM9SF2Q99805 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM9SF2Q99805 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.98■□□□□ 0.31
TM9SF2Q99805 AL138966.2-201ENST00000621997 464 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms