Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS2Q99743 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS2Q99743 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.94■□□□□ 0.46
NPAS2Q99743 AC010947.1-201ENST00000623454 693 ntBASIC17.94■□□□□ 0.46
NPAS2Q99743 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS2Q99743 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NPAS2Q99743 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS2Q99743 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPAS2Q99743 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NPAS2Q99743 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NPAS2Q99743 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS2Q99743 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS2Q99743 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 AC093677.2-201ENST00000600169 1863 ntBASIC17.93■□□□□ 0.46
NPAS2Q99743 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.93■□□□□ 0.46
NPAS2Q99743 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
NPAS2Q99743 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 RCN1P1-201ENST00000400413 996 ntBASIC17.93■□□□□ 0.46
NPAS2Q99743 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NPAS2Q99743 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.93■□□□□ 0.46
NPAS2Q99743 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS2Q99743 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS2Q99743 KRT18P21-201ENST00000515767 1272 ntBASIC17.93■□□□□ 0.46
NPAS2Q99743 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.93■□□□□ 0.46
NPAS2Q99743 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 AC145285.6-201ENST00000604632 637 ntBASIC17.93■□□□□ 0.46
NPAS2Q99743 AC130371.2-201ENST00000619443 611 ntBASIC17.93■□□□□ 0.46
NPAS2Q99743 AC068587.9-201ENST00000641814 219 ntBASIC17.93■□□□□ 0.46
NPAS2Q99743 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NPAS2Q99743 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS2Q99743 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS2Q99743 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.93■□□□□ 0.46
NPAS2Q99743 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
NPAS2Q99743 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS2Q99743 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS2Q99743 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.92■□□□□ 0.46
NPAS2Q99743 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS2Q99743 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS2Q99743 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NPAS2Q99743 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NPAS2Q99743 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NPAS2Q99743 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NPAS2Q99743 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS2Q99743 Z85996.1-201ENST00000494644 937 ntBASIC17.92■□□□□ 0.46
NPAS2Q99743 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS2Q99743 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS2Q99743 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS2Q99743 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.92■□□□□ 0.46
NPAS2Q99743 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NPAS2Q99743 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS2Q99743 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS2Q99743 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS2Q99743 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS2Q99743 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms