Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 AC020763.4-201ENST00000623414 4170 ntBASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 AC113347.1-201ENST00000413321 391 ntBASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 HOXB1-202ENST00000577092 1414 ntBASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIMC1Q8NDZ2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 SEC1P-202ENST00000473944 940 ntBASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 AL023973.1-201ENST00000624619 620 ntBASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 AC112497.1-201ENST00000624824 639 ntBASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 ESPNP-201ENST00000270691 2015 ntBASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIMC1Q8NDZ2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms