Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCBTB1Q8NDN9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCBTB1Q8NDN9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCBTB1Q8NDN9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCBTB1Q8NDN9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.57■□□□□ 0.4
RCBTB1Q8NDN9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 IGHV3-47-201ENST00000425060 335 ntBASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 RN7SL606P-201ENST00000472779 293 ntBASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 AC104692.2-201ENST00000603054 253 ntBASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCBTB1Q8NDN9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 AP000347.1-202ENST00000435868 847 ntBASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 AC004263.2-201ENST00000617183 678 ntBASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 NSUN5P1-202ENST00000421140 1535 ntBASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 NSUN5P2-203ENST00000457352 1529 ntBASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.55■□□□□ 0.4
RCBTB1Q8NDN9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 TNXA-203ENST00000507684 2038 ntBASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 NUS1P2-201ENST00000417358 873 ntBASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 VENTXP7-201ENST00000475503 772 ntBASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 AL353801.3-201ENST00000609898 542 ntBASIC17.54■□□□□ 0.4
RCBTB1Q8NDN9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms