Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 AL450487.1-201ENST00000426799 995 ntBASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 TPM4P1-201ENST00000436100 807 ntBASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 AC012313.10-201ENST00000623509 926 ntBASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 AC036111.1-201ENST00000533973 1582 ntBASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC33Q8N5R6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 AC092597.1-201ENST00000487352 616 ntBASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 AC018470.1-201ENST00000624790 3129 ntBASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC33Q8N5R6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 SPDYE13P-201ENST00000445314 798 ntBASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 MCCD1P1-208ENST00000445732 328 ntBASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 AC024243.1-201ENST00000609234 778 ntBASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms