Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 AC084018.2-201ENST00000613093 2607 ntBASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 DUX4L26-201ENST00000489078 1255 ntBASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 KRT18P22-201ENST00000402024 1347 ntBASIC19.42■□□□□ 0.7
CCNI2Q6ZMN8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 RCC2P6-201ENST00000526625 1557 ntBASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 MIR1238-201ENST00000408483 83 ntBASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 NUDT16P1-203ENST00000513809 620 ntBASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 AC087388.1-201ENST00000571370 1112 ntBASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNI2Q6ZMN8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 REXO1L9P-201ENST00000604264 2108 ntBASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 NAPSB-206ENST00000562112 1266 ntBASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 REXO1L10P-201ENST00000615707 1290 ntBASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNI2Q6ZMN8 TNRC18P3-201ENST00000441896 2691 ntBASIC19.39■□□□□ 0.7
CCNI2Q6ZMN8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.39■□□□□ 0.7
CCNI2Q6ZMN8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCNI2Q6ZMN8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCNI2Q6ZMN8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms