Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
LRIF1Q5T3J3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIF1Q5T3J3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 AC097488.1-201ENST00000507834 756 ntBASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 CD99P1-205ENST00000527459 561 ntBASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 KRT8P7-201ENST00000533003 1432 ntBASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.28■□□□□ 0.36
LRIF1Q5T3J3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 FAM197Y4-202ENST00000622692 608 ntBASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIF1Q5T3J3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
LRIF1Q5T3J3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 AC012317.2-201ENST00000623305 2251 ntBASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 AC099343.3-201ENST00000605834 2503 ntBASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIF1Q5T3J3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIF1Q5T3J3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms