Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RAB4AP20338 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RAB4AP20338 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 LINC02228-203ENST00000641970 1355 ntBASIC14.06□□□□□ -0.16
RAB4AP20338 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB4AP20338 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 AL122018.1-201ENST00000446607 2310 ntBASIC14.06□□□□□ -0.16
RAB4AP20338 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RAB4AP20338 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB4AP20338 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 AL591742.1-201ENST00000604433 565 ntBASIC14.05□□□□□ -0.16
RAB4AP20338 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RAB4AP20338 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB4AP20338 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB4AP20338 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.05□□□□□ -0.16
RAB4AP20338 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB4AP20338 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB4AP20338 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB4AP20338 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RAB4AP20338 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RAB4AP20338 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB4AP20338 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB4AP20338 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB4AP20338 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB4AP20338 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms