Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM28A0A1B0GU29 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM28A0A1B0GU29 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM28A0A1B0GU29 AC073592.3-201ENST00000625118 1834 ntBASIC19.6■□□□□ 0.73
SMIM28A0A1B0GU29 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.6■□□□□ 0.73
SMIM28A0A1B0GU29 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM28A0A1B0GU29 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.6■□□□□ 0.73
SMIM28A0A1B0GU29 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM28A0A1B0GU29 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 AC011840.4-201ENST00000578471 627 ntBASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMIM28A0A1B0GU29 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.58■□□□□ 0.73
SMIM28A0A1B0GU29 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SMIM28A0A1B0GU29 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM28A0A1B0GU29 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM28A0A1B0GU29 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM28A0A1B0GU29 ESPNP-201ENST00000270691 2015 ntBASIC19.58■□□□□ 0.73
SMIM28A0A1B0GU29 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 AC246785.2-201ENST00000432512 513 ntBASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 AC068472.1-201ENST00000474589 881 ntBASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 FOSL1P1-201ENST00000511041 816 ntBASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM28A0A1B0GU29 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 AC093503.3-201ENST00000624917 2352 ntBASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 TSPY19P-201ENST00000418461 509 ntBASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 TSPY18P-201ENST00000441642 509 ntBASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 UNC93B7-201ENST00000509439 705 ntBASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 TNXA-203ENST00000507684 2038 ntBASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SMIM28A0A1B0GU29 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 VENTXP7-201ENST00000475503 772 ntBASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 AC009154.2-201ENST00000621177 724 ntBASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM28A0A1B0GU29 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms