Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 AC008556.1-201ENST00000610908 2040 ntBASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 MESTP1-201ENST00000404287 994 ntBASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 MFAP1P1-201ENST00000442257 1255 ntBASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV30A0A087WSZ9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 AL391005.1-201ENST00000623953 2435 ntBASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 AL023284.2-201ENST00000405850 579 ntBASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 AC012618.2-201ENST00000428058 849 ntBASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 AC097488.1-201ENST00000507834 756 ntBASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV30A0A087WSZ9 MST1L-201ENST00000442552 2185 ntBASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 RPS2P55-201ENST00000397318 883 ntBASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 AL355355.2-201ENST00000442321 338 ntBASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 AC107956.1-201ENST00000494359 873 ntBASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms