Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 GOLGA2P11-201ENST00000562660 1621 ntBASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 BHLHE23-202ENST00000612929 1109 ntBASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 AC074183.2-201ENST00000623112 922 ntBASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SPTSSBQ8NFR3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 BICD1-207ENST00000551848 1962 ntBASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms