Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.71■■□□□ 1.23
SMC5Q8IY18 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.71■■□□□ 1.23
SMC5Q8IY18 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.71■■□□□ 1.23
SMC5Q8IY18 AC009065.1-201ENST00000564055 1225 ntBASIC22.71■■□□□ 1.23
SMC5Q8IY18 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.71■■□□□ 1.23
SMC5Q8IY18 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.71■■□□□ 1.23
SMC5Q8IY18 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SMC5Q8IY18 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SMC5Q8IY18 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.7■■□□□ 1.22
SMC5Q8IY18 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SMC5Q8IY18 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.7■■□□□ 1.22
SMC5Q8IY18 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 AL596275.1-201ENST00000423464 877 ntBASIC22.7■■□□□ 1.22
SMC5Q8IY18 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.7■■□□□ 1.22
SMC5Q8IY18 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.7■■□□□ 1.22
SMC5Q8IY18 ECEL1P2-202ENST00000465689 757 ntBASIC22.7■■□□□ 1.22
SMC5Q8IY18 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
SMC5Q8IY18 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.7■■□□□ 1.22
SMC5Q8IY18 LINC00896-202ENST00000609602 2128 ntBASIC22.7■■□□□ 1.22
SMC5Q8IY18 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SMC5Q8IY18 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SMC5Q8IY18 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SMC5Q8IY18 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.69■■□□□ 1.22
SMC5Q8IY18 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.69■■□□□ 1.22
SMC5Q8IY18 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.69■■□□□ 1.22
SMC5Q8IY18 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMC5Q8IY18 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 AC006116.8-202ENST00000587620 1550 ntBASIC22.68■■□□□ 1.22
SMC5Q8IY18 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SMC5Q8IY18 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SMC5Q8IY18 HMGA1P5-201ENST00000412453 271 ntBASIC22.68■■□□□ 1.22
SMC5Q8IY18 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.68■■□□□ 1.22
SMC5Q8IY18 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.68■■□□□ 1.22
SMC5Q8IY18 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.68■■□□□ 1.22
SMC5Q8IY18 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.68■■□□□ 1.22
SMC5Q8IY18 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.68■■□□□ 1.22
SMC5Q8IY18 NEK4P2-201ENST00000580004 1012 ntBASIC22.68■■□□□ 1.22
SMC5Q8IY18 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMC5Q8IY18 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMC5Q8IY18 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMC5Q8IY18 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMC5Q8IY18 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.67■■□□□ 1.22
SMC5Q8IY18 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
SMC5Q8IY18 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms