Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 BX088651.1-201ENST00000540551 451 ntBASIC16.98■□□□□ 0.31
VRK2Q86Y07 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 AC116562.4-202ENST00000641738 218 ntBASIC16.98■□□□□ 0.31
VRK2Q86Y07 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VRK2Q86Y07 AC138028.4-201ENST00000564984 1845 ntBASIC16.98■□□□□ 0.31
VRK2Q86Y07 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK2Q86Y07 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 HOXB1-202ENST00000577092 1414 ntBASIC16.97■□□□□ 0.31
VRK2Q86Y07 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 INGX-201ENST00000359239 846 ntBASIC16.97■□□□□ 0.31
VRK2Q86Y07 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 C2orf69P3-201ENST00000565542 1120 ntBASIC16.97■□□□□ 0.31
VRK2Q86Y07 WWOX-216ENST00000569818 525 ntBASIC16.97■□□□□ 0.31
VRK2Q86Y07 MIR4497-201ENST00000583208 89 ntBASIC16.97■□□□□ 0.31
VRK2Q86Y07 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 AC009102.3-201ENST00000623118 1491 ntBASIC16.97■□□□□ 0.31
VRK2Q86Y07 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 PHGDH-209ENST00000641074 1780 ntBASIC16.97■□□□□ 0.31
VRK2Q86Y07 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VRK2Q86Y07 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK2Q86Y07 AL096828.2-201ENST00000567259 1965 ntBASIC16.97■□□□□ 0.31
VRK2Q86Y07 KRT8P9-201ENST00000558927 1449 ntBASIC16.96■□□□□ 0.31
VRK2Q86Y07 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.96■□□□□ 0.31
VRK2Q86Y07 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.96■□□□□ 0.31
VRK2Q86Y07 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.96■□□□□ 0.31
VRK2Q86Y07 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.96■□□□□ 0.31
VRK2Q86Y07 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VRK2Q86Y07 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.96■□□□□ 0.31
VRK2Q86Y07 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.96■□□□□ 0.31
VRK2Q86Y07 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.96■□□□□ 0.31
VRK2Q86Y07 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK2Q86Y07 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VRK2Q86Y07 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms