Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHIC1Q5VXU3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHIC1Q5VXU3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHIC1Q5VXU3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 MTND4P13-201ENST00000402078 1023 ntBASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 GXYLT1P6-201ENST00000456472 1187 ntBASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 KRT18P41-201ENST00000518924 1277 ntBASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 AC007423.1-201ENST00000605009 627 ntBASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHIC1Q5VXU3 AC005082.1-201ENST00000413042 2259 ntBASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 AC211429.1-201ENST00000415277 523 ntBASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 AC133561.5-201ENST00000635547 218 ntBASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHIC1Q5VXU3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 PPIL3-202ENST00000392283 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 TPTE2P1-204ENST00000435256 593 ntBASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 AC090373.1-201ENST00000623955 603 ntBASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHIC1Q5VXU3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
CHIC1Q5VXU3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 VN1R48P-201ENST00000448149 1036 ntBASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 RSF1-IT1-201ENST00000528233 632 ntTSL 2 BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CHIC1Q5VXU3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 TRIM60P13-201ENST00000432350 1283 ntBASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 AC016550.1-201ENST00000505348 785 ntBASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHIC1Q5VXU3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms