RNA–Protein interactions for RNA: ENST00000505348.1

AC016550.1-201, humanhuman

BASIC

Gene AC016550.1, Length 785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016550.1-201ENST00000505348 AEBP2Q6ZN18 517 aaPredicted RBP33.83■■■■□ 3.01
AC016550.1-201ENST00000505348 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
AC016550.1-201ENST00000505348 SENP3Q9H4L4 574 aaPredicted RBP28.9■■■□□ 2.22
AC016550.1-201ENST00000505348 PHF23Q9BUL5 403 aaPredicted RBP28.43■■■□□ 2.14
AC016550.1-201ENST00000505348 FOXD1Q16676 465 aa27.01■■□□□ 1.91
AC016550.1-201ENST00000505348 POTEDQ86YR6 584 aa26.12■■□□□ 1.77
AC016550.1-201ENST00000505348 MSH5O43196 834 aa25.45■■□□□ 1.66
AC016550.1-201ENST00000505348 PIAS4Q8N2W9 510 aaPredicted RBP25.09■■□□□ 1.61
AC016550.1-201ENST00000505348 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
AC016550.1-201ENST00000505348 PPP6R1Q9UPN7 881 aa24.87■■□□□ 1.57
AC016550.1-201ENST00000505348 ADRA2BP18089 450 aa24.74■■□□□ 1.55
AC016550.1-201ENST00000505348 MAPK8IP2Q13387 824 aaPredicted RBP22.87■■□□□ 1.25
AC016550.1-201ENST00000505348 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
AC016550.1-201ENST00000505348 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
AC016550.1-201ENST00000505348 CACNB1Q02641 598 aaPredicted RBP22.23■■□□□ 1.15
AC016550.1-201ENST00000505348 PPP4R3CPQ6ZMV5 832 aa21.86■■□□□ 1.09
AC016550.1-201ENST00000505348 DCAF8L1A6NGE4 600 aa21.85■■□□□ 1.09
AC016550.1-201ENST00000505348 HOXD11P31277 338 aaPredicted RBP21.83■■□□□ 1.09
AC016550.1-201ENST00000505348 RNF39Q9H2S5 420 aa21.7■■□□□ 1.06
AC016550.1-201ENST00000505348 CNKSR2Q8WXI2 1034 aa21.57■■□□□ 1.04
AC016550.1-201ENST00000505348 RNF216Q9NWF9 866 aaPredicted RBP21.52■■□□□ 1.04
AC016550.1-201ENST00000505348 C1QBPQ07021 282 aaKnown RBP21.32■■□□□ 1
AC016550.1-201ENST00000505348 DNAJC5BQ9UF47 199 aa21.19■□□□□ 0.98
AC016550.1-201ENST00000505348 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
AC016550.1-201ENST00000505348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.72■□□□□ 0.91
AC016550.1-201ENST00000505348 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
AC016550.1-201ENST00000505348 POTEHQ6S545 545 aa20.32■□□□□ 0.84
AC016550.1-201ENST00000505348 U3KPZ7 1027 aaPredicted RBP20.3■□□□□ 0.84
AC016550.1-201ENST00000505348 DSG3P32926 999 aa20.15■□□□□ 0.82
AC016550.1-201ENST00000505348 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.81
AC016550.1-201ENST00000505348 CAPN15O75808 1086 aa20.08■□□□□ 0.81
AC016550.1-201ENST00000505348 KCNA4P22459 653 aa19.89■□□□□ 0.77
AC016550.1-201ENST00000505348 SLC4A2P04920 1241 aa19.81■□□□□ 0.76
AC016550.1-201ENST00000505348 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
AC016550.1-201ENST00000505348 APLP2Q06481 763 aa19.62■□□□□ 0.73
AC016550.1-201ENST00000505348 ZNF219Q9P2Y4 722 aaPredicted RBP19.62■□□□□ 0.73
AC016550.1-201ENST00000505348 ABCB7O75027 752 aa19.59■□□□□ 0.73
AC016550.1-201ENST00000505348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
AC016550.1-201ENST00000505348 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
AC016550.1-201ENST00000505348 SAMD1Q6SPF0 538 aaPredicted RBP19.38■□□□□ 0.69
AC016550.1-201ENST00000505348 RBM42Q9BTD8 480 aaKnown RBP19.2■□□□□ 0.66
AC016550.1-201ENST00000505348 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
AC016550.1-201ENST00000505348 POLA2Q14181 598 aa19.01■□□□□ 0.63
AC016550.1-201ENST00000505348 CHRDL2Q6WN34 429 aa18.99■□□□□ 0.63
AC016550.1-201ENST00000505348 SLC4A1APQ9BWU0 796 aaKnown RBP18.9■□□□□ 0.62
AC016550.1-201ENST00000505348 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
AC016550.1-201ENST00000505348 ATF5Q9Y2D1 282 aaPredicted RBP18.66■□□□□ 0.58
AC016550.1-201ENST00000505348 SP7Q8TDD2 431 aaPredicted RBP18.63■□□□□ 0.57
AC016550.1-201ENST00000505348 ZBTB12Q9Y330 459 aaPredicted RBP18.6■□□□□ 0.57
AC016550.1-201ENST00000505348 FOXD4L1Q9NU39 408 aa18.58■□□□□ 0.56
AC016550.1-201ENST00000505348 REM2Q8IYK8 340 aaPredicted RBP18.49■□□□□ 0.55
AC016550.1-201ENST00000505348 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
AC016550.1-201ENST00000505348 OSCARQ8IYS5 282 aa18.47■□□□□ 0.55
AC016550.1-201ENST00000505348 PIP4P2Q8N4L2 257 aa18.45■□□□□ 0.54
AC016550.1-201ENST00000505348 ZBTB22O15209 634 aa18.37■□□□□ 0.53
AC016550.1-201ENST00000505348 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
AC016550.1-201ENST00000505348 PITPNM1O00562 1244 aa18.32■□□□□ 0.52
AC016550.1-201ENST00000505348 FXR2P51116 673 aaKnown RBP eCLIP18.26■□□□□ 0.51
AC016550.1-201ENST00000505348 HAX1O00165 279 aa18.18■□□□□ 0.5
AC016550.1-201ENST00000505348 ATXN8OSP0DMR3 200 aa18.06■□□□□ 0.48
AC016550.1-201ENST00000505348 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
AC016550.1-201ENST00000505348 SPDYE6P0CI01 402 aa18■□□□□ 0.47
AC016550.1-201ENST00000505348 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
AC016550.1-201ENST00000505348 EVX2Q03828 476 aa17.98■□□□□ 0.47
AC016550.1-201ENST00000505348 FBLN2P98095 1184 aa17.9■□□□□ 0.46
AC016550.1-201ENST00000505348 PRKAR2AP13861 404 aaKnown RBP17.81■□□□□ 0.44
AC016550.1-201ENST00000505348 MKRN4PQ13434 485 aaPredicted RBP17.79■□□□□ 0.44
AC016550.1-201ENST00000505348 SPDYE1Q8NFV5 336 aaPredicted RBP17.78■□□□□ 0.44
AC016550.1-201ENST00000505348 SSUH2Q9Y2M2 353 aa17.75■□□□□ 0.43
AC016550.1-201ENST00000505348 CLEC11AQ9Y240 323 aa17.74■□□□□ 0.43
AC016550.1-201ENST00000505348 C19orf67A6NJJ6 358 aa17.7■□□□□ 0.42
AC016550.1-201ENST00000505348 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
AC016550.1-201ENST00000505348 GABBR2O75899 941 aa17.53■□□□□ 0.4
AC016550.1-201ENST00000505348 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
AC016550.1-201ENST00000505348 LHX8Q68G74 356 aa17.47■□□□□ 0.39
AC016550.1-201ENST00000505348 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
AC016550.1-201ENST00000505348 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
AC016550.1-201ENST00000505348 CD44P16070 742 aaKnown RBP17.22■□□□□ 0.35
AC016550.1-201ENST00000505348 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
AC016550.1-201ENST00000505348 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
AC016550.1-201ENST00000505348 PLSCR2Q9NRY7 297 aa17.14■□□□□ 0.33
AC016550.1-201ENST00000505348 CLCN6P51797 869 aa17.08■□□□□ 0.32
AC016550.1-201ENST00000505348 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
AC016550.1-201ENST00000505348 DCBLD2Q96PD2 775 aa16.91■□□□□ 0.3
AC016550.1-201ENST00000505348 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
AC016550.1-201ENST00000505348 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
AC016550.1-201ENST00000505348 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
AC016550.1-201ENST00000505348 GALR2O43603 387 aaPredicted RBP16.78■□□□□ 0.28
AC016550.1-201ENST00000505348 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
AC016550.1-201ENST00000505348 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
AC016550.1-201ENST00000505348 PHF12Q96QT6 1004 aa16.63■□□□□ 0.25
AC016550.1-201ENST00000505348 POTEB2H3BUK9 544 aa16.61■□□□□ 0.25
AC016550.1-201ENST00000505348 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
AC016550.1-201ENST00000505348 MNX1P50219 401 aaPredicted RBP16.58■□□□□ 0.24
AC016550.1-201ENST00000505348 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
AC016550.1-201ENST00000505348 POTEMA6NI47 508 aa16.5■□□□□ 0.23
AC016550.1-201ENST00000505348 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
AC016550.1-201ENST00000505348 FKBP8Q14318 412 aa16.47■□□□□ 0.23
AC016550.1-201ENST00000505348 POTEGQ6S5H5 508 aa16.42■□□□□ 0.22
AC016550.1-201ENST00000505348 ASTLQ6HA08 431 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms