Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS3AP61247 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.22■□□□□ 0.35
RPS3AP61247 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS3AP61247 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.22■□□□□ 0.35
RPS3AP61247 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS3AP61247 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS3AP61247 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RPS3AP61247 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS3AP61247 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS3AP61247 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.22■□□□□ 0.35
RPS3AP61247 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS3AP61247 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS3AP61247 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.22■□□□□ 0.35
RPS3AP61247 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS3AP61247 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RPS3AP61247 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.21■□□□□ 0.35
RPS3AP61247 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.21■□□□□ 0.35
RPS3AP61247 KRT8P41-201ENST00000533985 1514 ntBASIC17.21■□□□□ 0.35
RPS3AP61247 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS3AP61247 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS3AP61247 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS3AP61247 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RPS3AP61247 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS3AP61247 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.21■□□□□ 0.35
RPS3AP61247 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RPS3AP61247 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS3AP61247 AC096733.2-201ENST00000609937 1394 ntBASIC17.21■□□□□ 0.35
RPS3AP61247 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.21■□□□□ 0.35
RPS3AP61247 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 AC211429.1-201ENST00000415277 523 ntBASIC17.21■□□□□ 0.35
RPS3AP61247 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS3AP61247 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.21■□□□□ 0.35
RPS3AP61247 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.21■□□□□ 0.35
RPS3AP61247 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.21■□□□□ 0.35
RPS3AP61247 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RPS3AP61247 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS3AP61247 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.21■□□□□ 0.34
RPS3AP61247 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPS3AP61247 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.21■□□□□ 0.34
RPS3AP61247 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RPS3AP61247 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS3AP61247 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS3AP61247 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RPS3AP61247 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.2■□□□□ 0.34
RPS3AP61247 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
RPS3AP61247 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS3AP61247 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 TSPY21P-201ENST00000433481 731 ntBASIC17.2■□□□□ 0.34
RPS3AP61247 AC008040.2-201ENST00000461049 708 ntBASIC17.2■□□□□ 0.34
RPS3AP61247 PRSS44-201ENST00000515154 1146 ntBASIC17.2■□□□□ 0.34
RPS3AP61247 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RPS3AP61247 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS3AP61247 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.2■□□□□ 0.34
RPS3AP61247 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPS3AP61247 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RPS3AP61247 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RPS3AP61247 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RPS3AP61247 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.19■□□□□ 0.34
RPS3AP61247 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS3AP61247 AC128688.1-201ENST00000487626 519 ntBASIC17.19■□□□□ 0.34
RPS3AP61247 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms