Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.9■□□□□ 0.3
THBS1P07996 KRT18P21-201ENST00000515767 1272 ntBASIC16.9■□□□□ 0.3
THBS1P07996 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
THBS1P07996 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.9■□□□□ 0.3
THBS1P07996 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.9■□□□□ 0.3
THBS1P07996 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.9■□□□□ 0.3
THBS1P07996 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
THBS1P07996 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.9■□□□□ 0.3
THBS1P07996 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.9■□□□□ 0.3
THBS1P07996 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
THBS1P07996 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
THBS1P07996 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
THBS1P07996 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.89■□□□□ 0.3
THBS1P07996 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.89■□□□□ 0.3
THBS1P07996 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
THBS1P07996 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.89■□□□□ 0.3
THBS1P07996 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
THBS1P07996 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
THBS1P07996 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.89■□□□□ 0.29
THBS1P07996 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.89■□□□□ 0.29
THBS1P07996 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.89■□□□□ 0.29
THBS1P07996 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.89■□□□□ 0.29
THBS1P07996 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.89■□□□□ 0.29
THBS1P07996 AL512604.3-201ENST00000569583 964 ntBASIC16.89■□□□□ 0.29
THBS1P07996 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
THBS1P07996 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.89■□□□□ 0.29
THBS1P07996 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
THBS1P07996 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
THBS1P07996 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.89■□□□□ 0.29
THBS1P07996 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.89■□□□□ 0.29
THBS1P07996 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THBS1P07996 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.88■□□□□ 0.29
THBS1P07996 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
THBS1P07996 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.88■□□□□ 0.29
THBS1P07996 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.88■□□□□ 0.29
THBS1P07996 NAPSB-206ENST00000562112 1266 ntBASIC16.88■□□□□ 0.29
THBS1P07996 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.88■□□□□ 0.29
THBS1P07996 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
THBS1P07996 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 AL133373.2-201ENST00000623187 2828 ntBASIC16.88■□□□□ 0.29
THBS1P07996 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THBS1P07996 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.88■□□□□ 0.29
THBS1P07996 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.87■□□□□ 0.29
THBS1P07996 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.87■□□□□ 0.29
THBS1P07996 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
THBS1P07996 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.87■□□□□ 0.29
THBS1P07996 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 MMP23A-201ENST00000234610 1017 ntBASIC16.87■□□□□ 0.29
THBS1P07996 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
THBS1P07996 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.87■□□□□ 0.29
THBS1P07996 AC010947.1-201ENST00000623454 693 ntBASIC16.87■□□□□ 0.29
THBS1P07996 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.87■□□□□ 0.29
THBS1P07996 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms