Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.61■□□□□ 0.57
HLA-DQB2P05538 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 PHGDH-209ENST00000641074 1780 ntBASIC18.61■□□□□ 0.57
HLA-DQB2P05538 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 RNF152P1-201ENST00000397754 604 ntBASIC18.61■□□□□ 0.57
HLA-DQB2P05538 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.61■□□□□ 0.57
HLA-DQB2P05538 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQB2P05538 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 TMPOP1-202ENST00000424642 1267 ntBASIC18.6■□□□□ 0.57
HLA-DQB2P05538 TSPY5P-201ENST00000426936 936 ntBASIC18.6■□□□□ 0.57
HLA-DQB2P05538 PVRIG2P-201ENST00000435460 978 ntBASIC18.6■□□□□ 0.57
HLA-DQB2P05538 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 KRT18P38-201ENST00000449496 1282 ntBASIC18.6■□□□□ 0.57
HLA-DQB2P05538 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 KRT18P21-201ENST00000515767 1272 ntBASIC18.6■□□□□ 0.57
HLA-DQB2P05538 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 AC079602.3-201ENST00000623931 403 ntBASIC18.6■□□□□ 0.57
HLA-DQB2P05538 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQB2P05538 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 STARP1-201ENST00000397973 869 ntBASIC18.59■□□□□ 0.57
HLA-DQB2P05538 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DQB2P05538 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.58■□□□□ 0.57
HLA-DQB2P05538 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms