Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 TSPY23P-201ENST00000440136 739 ntBASIC16.52■□□□□ 0.24
HLA-DPB1P04440 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 AC112777.1-201ENST00000540175 1423 ntBASIC16.52■□□□□ 0.23
HLA-DPB1P04440 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DPB1P04440 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 RCC2P6-201ENST00000526625 1557 ntBASIC16.51■□□□□ 0.23
HLA-DPB1P04440 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 MTMR9LP-203ENST00000426597 1545 ntBASIC16.51■□□□□ 0.23
HLA-DPB1P04440 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.51■□□□□ 0.23
HLA-DPB1P04440 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 HLA-A-209ENST00000638375 975 ntBASIC16.51■□□□□ 0.23
HLA-DPB1P04440 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DPB1P04440 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 UBE2SP1-201ENST00000450587 669 ntBASIC16.5■□□□□ 0.23
HLA-DPB1P04440 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DPB1P04440 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.49■□□□□ 0.23
HLA-DPB1P04440 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPB1P04440 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms