Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.23■□□□□ 0.67
APOEP02649 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.23■□□□□ 0.67
APOEP02649 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.23■□□□□ 0.67
APOEP02649 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.23■□□□□ 0.67
APOEP02649 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.23■□□□□ 0.67
APOEP02649 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 AC112777.1-201ENST00000540175 1423 ntBASIC19.23■□□□□ 0.67
APOEP02649 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.23■□□□□ 0.67
APOEP02649 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 AC135050.7-201ENST00000624508 2218 ntBASIC19.23■□□□□ 0.67
APOEP02649 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOEP02649 ANO7L1-203ENST00000602586 1720 ntBASIC19.22■□□□□ 0.67
APOEP02649 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 AC020763.4-201ENST00000623414 4170 ntBASIC19.22■□□□□ 0.67
APOEP02649 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.22■□□□□ 0.67
APOEP02649 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.22■□□□□ 0.67
APOEP02649 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.22■□□□□ 0.67
APOEP02649 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 RASA4DP-201ENST00000460726 1199 ntBASIC19.22■□□□□ 0.67
APOEP02649 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.22■□□□□ 0.67
APOEP02649 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.22■□□□□ 0.67
APOEP02649 MIR3917-201ENST00000580971 93 ntBASIC19.22■□□□□ 0.67
APOEP02649 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
APOEP02649 KRT8P50-201ENST00000562022 1438 ntBASIC19.22■□□□□ 0.67
APOEP02649 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.22■□□□□ 0.67
APOEP02649 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
APOEP02649 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOEP02649 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.22■□□□□ 0.67
APOEP02649 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.22■□□□□ 0.67
APOEP02649 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APOEP02649 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
APOEP02649 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.21■□□□□ 0.67
APOEP02649 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.21■□□□□ 0.67
APOEP02649 SPDYE15P-201ENST00000424157 909 ntBASIC19.21■□□□□ 0.67
APOEP02649 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.21■□□□□ 0.67
APOEP02649 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.21■□□□□ 0.67
APOEP02649 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APOEP02649 MIR3180-4-201ENST00000582223 153 ntBASIC19.21■□□□□ 0.67
APOEP02649 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
APOEP02649 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
APOEP02649 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
APOEP02649 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOEP02649 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.21■□□□□ 0.67
APOEP02649 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.2■□□□□ 0.66
APOEP02649 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOEP02649 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
APOEP02649 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOEP02649 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.2■□□□□ 0.66
APOEP02649 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOEP02649 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms