Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.82■□□□□ 0.6
TOP3BO95985 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TOP3BO95985 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TOP3BO95985 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 KRT8P10-201ENST00000450021 1447 ntBASIC18.82■□□□□ 0.6
TOP3BO95985 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP3BO95985 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.81■□□□□ 0.6
TOP3BO95985 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TOP3BO95985 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP3BO95985 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP3BO95985 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP3BO95985 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP3BO95985 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP3BO95985 SLC25A1P2-201ENST00000430693 912 ntBASIC18.81■□□□□ 0.6
TOP3BO95985 ATP5G2P1-201ENST00000433580 426 ntBASIC18.81■□□□□ 0.6
TOP3BO95985 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.81■□□□□ 0.6
TOP3BO95985 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.81■□□□□ 0.6
TOP3BO95985 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.81■□□□□ 0.6
TOP3BO95985 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TOP3BO95985 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.81■□□□□ 0.6
TOP3BO95985 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
TOP3BO95985 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.81■□□□□ 0.6
TOP3BO95985 AC092119.3-201ENST00000612618 583 ntBASIC18.81■□□□□ 0.6
TOP3BO95985 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.81■□□□□ 0.6
TOP3BO95985 CR769767.2-201ENST00000622735 460 ntBASIC18.81■□□□□ 0.6
TOP3BO95985 AC067852.2-201ENST00000590513 2313 ntBASIC18.81■□□□□ 0.6
TOP3BO95985 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.81■□□□□ 0.6
TOP3BO95985 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP3BO95985 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.81■□□□□ 0.6
TOP3BO95985 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TOP3BO95985 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP3BO95985 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.81■□□□□ 0.6
TOP3BO95985 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TOP3BO95985 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.8■□□□□ 0.6
TOP3BO95985 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.8■□□□□ 0.6
TOP3BO95985 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.8■□□□□ 0.6
TOP3BO95985 UNC93B7-201ENST00000509439 705 ntBASIC18.8■□□□□ 0.6
TOP3BO95985 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.8■□□□□ 0.6
TOP3BO95985 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TOP3BO95985 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.8■□□□□ 0.6
TOP3BO95985 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
TOP3BO95985 AC083849.1-201ENST00000615227 514 ntBASIC18.8■□□□□ 0.6
TOP3BO95985 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.8■□□□□ 0.6
TOP3BO95985 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TOP3BO95985 AL031432.5-201ENST00000641059 760 ntBASIC18.8■□□□□ 0.6
TOP3BO95985 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TOP3BO95985 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TOP3BO95985 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TOP3BO95985 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.8■□□□□ 0.6
TOP3BO95985 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP3BO95985 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TOP3BO95985 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TOP3BO95985 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.79■□□□□ 0.6
TOP3BO95985 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.79■□□□□ 0.6
TOP3BO95985 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.79■□□□□ 0.6
TOP3BO95985 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.79■□□□□ 0.6
TOP3BO95985 KRT8P45-201ENST00000414328 1447 ntBASIC18.79■□□□□ 0.6
TOP3BO95985 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TOP3BO95985 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.79■□□□□ 0.6
TOP3BO95985 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TOP3BO95985 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 AC138932.1-201ENST00000534164 6830 ntBASIC18.79■□□□□ 0.6
TOP3BO95985 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP3BO95985 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TOP3BO95985 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP3BO95985 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms