Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC009113.1-201ENST00000570267 2443 ntBASIC17.6■□□□□ 0.41
PRICKLE3O43900 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
PRICKLE3O43900 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRICKLE3O43900 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRICKLE3O43900 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.6■□□□□ 0.41
PRICKLE3O43900 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PRICKLE3O43900 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRICKLE3O43900 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PRICKLE3O43900 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 KRT18P48-201ENST00000434763 852 ntBASIC17.59■□□□□ 0.41
PRICKLE3O43900 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.59■□□□□ 0.41
PRICKLE3O43900 AL020996.1-203ENST00000536896 2307 ntBASIC17.59■□□□□ 0.41
PRICKLE3O43900 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRICKLE3O43900 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRICKLE3O43900 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
PRICKLE3O43900 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.58■□□□□ 0.41
PRICKLE3O43900 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.58■□□□□ 0.41
PRICKLE3O43900 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRICKLE3O43900 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.58■□□□□ 0.41
PRICKLE3O43900 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 AC113404.2-201ENST00000507884 177 ntBASIC17.58■□□□□ 0.4
PRICKLE3O43900 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 AP000550.4-202ENST00000639755 178 ntBASIC17.58■□□□□ 0.4
PRICKLE3O43900 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PRICKLE3O43900 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRICKLE3O43900 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 IGHGP-201ENST00000390555 1178 ntBASIC17.57■□□□□ 0.4
PRICKLE3O43900 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 AP003733.1-201ENST00000491725 852 ntBASIC17.57■□□□□ 0.4
PRICKLE3O43900 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRICKLE3O43900 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.57■□□□□ 0.4
PRICKLE3O43900 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms