Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
ABCC4O15439 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.32■■□□□ 1.32
ABCC4O15439 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
ABCC4O15439 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ABCC4O15439 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.32■■□□□ 1.32
ABCC4O15439 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.32■■□□□ 1.32
ABCC4O15439 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.32■■□□□ 1.32
ABCC4O15439 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ABCC4O15439 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.32■■□□□ 1.32
ABCC4O15439 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.32■■□□□ 1.32
ABCC4O15439 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.32■■□□□ 1.32
ABCC4O15439 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
ABCC4O15439 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCC4O15439 AC135050.7-201ENST00000624508 2218 ntBASIC23.31■■□□□ 1.32
ABCC4O15439 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCC4O15439 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCC4O15439 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCC4O15439 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ABCC4O15439 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCC4O15439 AL024508.2-201ENST00000607749 1894 ntBASIC23.31■■□□□ 1.32
ABCC4O15439 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.31■■□□□ 1.32
ABCC4O15439 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.31■■□□□ 1.32
ABCC4O15439 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCC4O15439 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.31■■□□□ 1.32
ABCC4O15439 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCC4O15439 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.31■■□□□ 1.32
ABCC4O15439 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 UNC93B7-201ENST00000509439 705 ntBASIC23.31■■□□□ 1.32
ABCC4O15439 KRT8P26-201ENST00000534154 1276 ntBASIC23.31■■□□□ 1.32
ABCC4O15439 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.31■■□□□ 1.32
ABCC4O15439 AL136038.4-201ENST00000603606 1261 ntBASIC23.31■■□□□ 1.32
ABCC4O15439 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.31■■□□□ 1.32
ABCC4O15439 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCC4O15439 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 AL354751.1-201ENST00000412768 1863 ntBASIC23.3■■□□□ 1.32
ABCC4O15439 AC093677.2-201ENST00000600169 1863 ntBASIC23.3■■□□□ 1.32
ABCC4O15439 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.3■■□□□ 1.32
ABCC4O15439 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.3■■□□□ 1.32
ABCC4O15439 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCC4O15439 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
ABCC4O15439 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.3■■□□□ 1.32
ABCC4O15439 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.3■■□□□ 1.32
ABCC4O15439 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.3■■□□□ 1.32
ABCC4O15439 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.3■■□□□ 1.32
ABCC4O15439 AC009065.1-201ENST00000564055 1225 ntBASIC23.3■■□□□ 1.32
ABCC4O15439 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ABCC4O15439 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
ABCC4O15439 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.3■■□□□ 1.32
ABCC4O15439 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 AL391807.1-203ENST00000604392 2365 ntBASIC23.29■■□□□ 1.32
ABCC4O15439 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.29■■□□□ 1.32
ABCC4O15439 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC23.29■■□□□ 1.32
ABCC4O15439 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ABCC4O15439 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.29■■□□□ 1.32
ABCC4O15439 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.29■■□□□ 1.32
ABCC4O15439 AC111152.3-201ENST00000569699 673 ntBASIC23.29■■□□□ 1.32
ABCC4O15439 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCC4O15439 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCC4O15439 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.28■■□□□ 1.32
ABCC4O15439 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.28■■□□□ 1.32
ABCC4O15439 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ABCC4O15439 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ABCC4O15439 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC23.28■■□□□ 1.32
ABCC4O15439 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC23.28■■□□□ 1.32
ABCC4O15439 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCC4O15439 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ABCC4O15439 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms